Detailed information    

insolico Bioinformatically predicted

Overview


Name   comX   Type   Regulator
Locus tag   A8O17_RS15380 Genome accession   NZ_CP015975
Coordinates   2917165..2917332 (-) Length   55 a.a.
NCBI ID   WP_003242801.1    Uniprot ID   G9LQ80
Organism   Bacillus subtilis subsp. subtilis strain delta6     
Function   binding to ComP; trigger autophosphorylation of ComP (predicted from homology)   
Competence regulation

Genomic Context


Location: 2912165..2922332
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A8O17_RS15350 (A8O17_15350) mrpE 2912560..2913036 (+) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  A8O17_RS15355 (A8O17_15355) mrpF 2913036..2913320 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  A8O17_RS15360 (A8O17_15360) mnhG 2913304..2913678 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  A8O17_RS15365 (A8O17_15365) yuxO 2913717..2914097 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  A8O17_RS15370 (A8O17_15370) comA 2914116..2914760 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  A8O17_RS15375 (A8O17_15375) comP 2914841..2917150 (-) 2310 WP_003242894.1 two-component system sensor histidine kinase ComP Regulator
  A8O17_RS15380 (A8O17_15380) comX 2917165..2917332 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  A8O17_RS15385 (A8O17_15385) comQ 2917320..2918219 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  A8O17_RS15390 (A8O17_15390) degQ 2918404..2918544 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  A8O17_RS20985 - 2918766..2918891 (+) 126 WP_003228793.1 hypothetical protein -
  A8O17_RS15395 (A8O17_15395) - 2919005..2919373 (+) 369 WP_003243784.1 hypothetical protein -
  A8O17_RS15400 (A8O17_15400) pdeH 2919349..2920578 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  A8O17_RS15405 (A8O17_15405) pncB 2920715..2922187 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 55 a.a.        Molecular weight: 6518.42 Da        Isoelectric Point: 4.3285

>NTDB_id=184909 A8O17_RS15380 WP_003242801.1 2917165..2917332(-) (comX) [Bacillus subtilis subsp. subtilis strain delta6]
MQDLINYFLNYPEALKKLKNKEACLIGFDVQETETIIKAYNDYYLADPITRQWGD

Nucleotide


Download         Length: 168 bp        

>NTDB_id=184909 A8O17_RS15380 WP_003242801.1 2917165..2917332(-) (comX) [Bacillus subtilis subsp. subtilis strain delta6]
ATGCAAGACCTAATTAACTACTTTTTAAATTATCCTGAGGCTTTAAAAAAATTGAAAAATAAAGAAGCCTGCCTTATAGG
TTTTGATGTGCAAGAAACTGAAACAATAATTAAAGCTTATAATGATTATTATCTGGCTGATCCAATAACCCGTCAATGGG
GTGATTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G9LQ80

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comX Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment