Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LLUC109_RS10570 Genome accession   NZ_CP015907
Coordinates   2072042..2073328 (-) Length   428 a.a.
NCBI ID   WP_015082936.1    Uniprot ID   A0AAJ6MKB5
Organism   Lactococcus cremoris strain UC109     
Function   processing of ComS (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
IScluster/Tn 2073701..2076196 2072042..2073328 flank 373


Gene organization within MGE regions


Location: 2072042..2076196
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLUC109_RS10570 (LLUC109_2129) eeP 2072042..2073328 (-) 1287 WP_015082936.1 RIP metalloprotease RseP Regulator
  LLUC109_RS10575 (LLUC109_2130) - 2073347..2074150 (-) 804 WP_015082937.1 phosphatidate cytidylyltransferase -
  LLUC109_RS10580 (LLUC109_2131) - 2074150..2074884 (-) 735 WP_011836054.1 isoprenyl transferase -
  LLUC109_RS10585 (LLUC109_2132) yajC 2075234..2075566 (-) 333 WP_011677192.1 preprotein translocase subunit YajC -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46437.99 Da        Isoelectric Point: 6.7736

>NTDB_id=183343 LLUC109_RS10570 WP_015082936.1 2072042..2073328(-) (eeP) [Lactococcus cremoris strain UC109]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEAVNSGDENSVSNIVRRINLSEHVELEEAVPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIVPLDVQYQSAGVFHKMLTNFGGPLNNFILGLVAFIVLTFIQGGVPSNSNAIGQVEKGTPAYTAGLKSGDKIQAV
NGTKTADWDKLVTEISSSNGKELKLEIIRSGKSETLAVTPKKKDGSYRVGIMQSMKTGFFDKITGGFVQAGQATTAIFRA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIIQLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSPEKES
IITLVGVVFMLVLFMAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=183343 LLUC109_RS10570 WP_015082936.1 2072042..2073328(-) (eeP) [Lactococcus cremoris strain UC109]
TTGATAGAAACTCTGATTACTTTTATTATTATTTTTGGTATTATTGTCGCTATTCATGAATATGGTCACCTTTGGTGGGC
AAAACGTTCTGGAATTCTAGTGCGTGAATATGCCGTAGGAATGGGGCCGAAGATTTTTGCTCATCAAGCAAAAGATGGAA
CGCTCTACACGATTCGAATTTTACCGCTTGGTGGCTATGTTCGTTTGGCCGGCTGGGGTGATGATAAAACTGAAATAAAA
AAAGGACAAGCTGCAAGTCTGGTTGTCAGTAAATCTGAAGCAGTAAATTCAGGAGATGAAAATTCTGTCAGTAATATTGT
CAGAAGAATTAATCTGTCAGAACATGTGGAATTAGAAGAAGCTGTTCCAATGTTAATCACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTGTTTGGAGAAATCAAACGTTATTCAGTTGACCATGATGCCACAATTATTGAAGAAGAT
GGCACTGAAGTCCGGATTGTTCCTCTTGATGTTCAATATCAATCAGCAGGGGTCTTCCATAAGATGTTGACGAATTTCGG
TGGTCCTTTGAATAACTTTATTCTAGGACTTGTCGCTTTTATCGTTTTAACTTTTATTCAAGGAGGCGTTCCATCAAATT
CTAATGCTATTGGGCAAGTAGAAAAAGGAACACCAGCCTACACCGCAGGCTTGAAATCTGGAGATAAAATTCAAGCTGTC
AATGGAACTAAAACAGCAGATTGGGATAAATTGGTCACAGAAATTTCAAGTTCTAATGGAAAAGAATTAAAACTTGAAAT
TATCCGCTCAGGCAAATCAGAAACTTTGGCAGTTACCCCTAAAAAGAAGGATGGCAGTTATCGTGTTGGAATCATGCAAT
CTATGAAAACAGGCTTCTTTGATAAAATTACAGGTGGTTTTGTTCAAGCAGGACAAGCGACCACAGCAATTTTCAGAGCA
TTAGGAAGTCTGATTGCACGACCGAGTCTTGATAAACTGGGTGGGCCAGTTGCCATCTATCAACTCAGCGGACAAGCGGC
AAGAGCAGGTTTGCCAACAATTATTCAGTTGTTAGCTATGCTCTCAATTAACTTAGGAATTGTCAATCTTTTCCCTATTC
CAGTGCTTGACGGTGGAAAAATCGTCTTAAATATTATTGAAGCAATTCGTGGCAAAGCACTTTCGCCTGAGAAAGAATCA
ATTATCACATTAGTCGGAGTTGTCTTCATGCTTGTGCTCTTTATGGCTGTAACATGGAATGACATTCTACGGGCTTTTGT
CAACTAA

Domains


Predicted by InterproScan.

(217-279)

(7-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

55.916

100

0.563

  eeP Streptococcus thermophilus LMD-9

55.684

100

0.561


Multiple sequence alignment