Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   BV121_RS02870 Genome accession   NZ_CP020008
Coordinates   562470..562973 (+) Length   167 a.a.
NCBI ID   WP_011272085.1    Uniprot ID   Q4QN52
Organism   Haemophilus influenzae strain 5P28H1     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 557470..567973
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BV121_RS02830 (BV121_578) atpF 557811..558281 (-) 471 WP_005629246.1 F0F1 ATP synthase subunit B -
  BV121_RS02835 (BV121_579) atpE 558331..558585 (-) 255 WP_005652035.1 F0F1 ATP synthase subunit C -
  BV121_RS02840 (BV121_580) atpB 558641..559429 (-) 789 WP_005629251.1 F0F1 ATP synthase subunit A -
  BV121_RS02845 (BV121_581) - 559466..559840 (-) 375 WP_011272082.1 ATP synthase subunit I -
  BV121_RS02850 (BV121_582) rsmG 559966..560577 (-) 612 WP_005652031.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  BV121_RS02855 (BV121_583) - 560717..561094 (-) 378 WP_011272083.1 PRD domain-containing protein -
  BV121_RS02860 (BV121_585) - 561210..561812 (+) 603 WP_005652027.1 beta-phosphoglucomutase family hydrolase -
  BV121_RS02865 (BV121_586) - 561812..562285 (+) 474 WP_011272084.1 YqaA family protein -
  BV121_RS02870 (BV121_587) luxS 562470..562973 (+) 504 WP_011272085.1 S-ribosylhomocysteine lyase Regulator
  BV121_RS02875 - 563075..563870 (+) 796 Protein_539 IS3 family transposase -
  BV121_RS02880 (BV121_588) aphA 563917..564624 (-) 708 WP_005652021.1 acid phosphatase AphA -
  BV121_RS02885 (BV121_589) hslV 564844..565371 (+) 528 WP_011272086.1 ATP-dependent protease subunit HslV -
  BV121_RS02890 (BV121_590) hslU 565382..566716 (+) 1335 WP_005666443.1 HslU--HslV peptidase ATPase subunit -
  BV121_RS02895 (BV121_591) - 566786..567838 (-) 1053 WP_005691316.1 extracellular solute-binding protein -

Sequence

Protein


Download         Length: 167 a.a.        Molecular weight: 18518.17 Da        Isoelectric Point: 4.8168

>NTDB_id=183085 BV121_RS02870 WP_011272085.1 562470..562973(+) (luxS) [Haemophilus influenzae strain 5P28H1]
MPLLDSFKVDHTKMNAPAVRIAKTMCTPKGDNITVFDLRFCIPNKEILSPKGIHTLEHLFAGFMRDHLNGDSIEIIDISP
MGCRTGFYMSLIGTPNEQEVSEAWLASMQDVLGVQDQASIPELNIYQCGSYTEHSLEDAHEIAKNVIARGIGVNKNEDLS
LDNSLLK

Nucleotide


Download         Length: 504 bp        

>NTDB_id=183085 BV121_RS02870 WP_011272085.1 562470..562973(+) (luxS) [Haemophilus influenzae strain 5P28H1]
ATGCCATTACTTGATAGTTTTAAAGTGGATCACACAAAAATGAACGCACCTGCAGTACGCATTGCAAAAACGATGTGCAC
GCCAAAAGGCGATAATATTACTGTTTTTGATTTACGTTTTTGTATTCCAAACAAAGAAATTCTTTCCCCAAAAGGCATTC
ATACACTTGAACATTTATTTGCTGGATTTATGCGCGATCATTTAAATGGCGATAGCATAGAAATTATTGATATTTCTCCG
ATGGGATGTCGCACGGGATTTTATATGTCTTTGATTGGCACACCAAATGAACAGGAAGTGTCTGAGGCTTGGTTAGCTTC
AATGCAAGATGTTTTAGGTGTACAAGATCAAGCTTCTATTCCCGAATTAAATATCTATCAATGCGGAAGCTATACGGAAC
ATTCCTTAGAAGATGCACACGAAATTGCCAAAAATGTTATCGCACGCGGTATAGGTGTAAATAAAAATGAAGATTTGTCA
CTCGATAATTCCTTATTAAAATAG

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q4QN52

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

74.096

99.401

0.737

Multiple sequence alignment