Detailed information NTG0182930

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: B2G84_RS10840
• Genome accession: NZ_CP019979
• Coordinates: 2074048..2075157 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264863.1
• Uniprot ID: Q8DWQ8
• Organism: Streptococcus agalactiae strain Sag158
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2069048..2080157

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B2G84_RS10815 (B2G84_10815)	-	2069421..2070260 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
B2G84_RS10820 (B2G84_10820)	pgsA	2070260..2070802 (-)	543	WP_000976003.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
B2G84_RS10825 (B2G84_10825)	yfmH	2070925..2072208 (-)	1284	WP_000217754.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
B2G84_RS10830 (B2G84_10830)	yfmF	2072210..2073453 (-)	1244	Protein_2022	EF-P 5-aminopentanol modification-associated protein YfmF	-
B2G84_RS10835 (B2G84_10835)	yaaA	2073692..2074045 (+)	354	WP_000384871.1	S4 domain-containing protein YaaA	-
B2G84_RS10840 (B2G84_10840)	recF	2074048..2075157 (+)	1110	WP_000264863.1	DNA replication/repair protein RecF	Machinery gene
B2G84_RS10845 (B2G84_10845)	-	2075169..2076035 (-)	867	WP_000398683.1	GRP family sugar transporter	-
B2G84_RS10850 (B2G84_10850)	-	2076091..2076753 (-)	663	WP_001865840.1	helix-turn-helix domain-containing protein	-
B2G84_RS10855 (B2G84_10855)	guaB	2076828..2078309 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
B2G84_RS10860 (B2G84_10860)	-	2078466..2078951 (-)	486	WP_001034427.1	arginine repressor	-
B2G84_RS10865 (B2G84_10865)	-	2078961..2079641 (-)	681	WP_000628851.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42526.35 Da
• Isoelectric Point: 7.3132

>NTDB_id=182930 B2G84_RS10840 WP_000264863.1 2074048..2075157(+) (recF) [Streptococcus agalactiae strain Sag158]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LNLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLTVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFASQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=182930 B2G84_RS10840 WP_000264863.1 2074048..2075157(+) (recF) [Streptococcus agalactiae strain Sag158]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCACCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGTGGCCAT
CTTAACTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAAGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGTCTAAGACGAAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTAACAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGCTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q8DWQ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.085	98.374	0.621
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444