Detailed information NTG0182831

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: B1H24_RS11350
• Genome accession: NZ_CP019978
• Coordinates: 2175930..2177039 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain Sag37
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2170930..2182039

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B1H24_RS11325 (B1H24_11325)	-	2171302..2172141 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
B1H24_RS11330 (B1H24_11330)	pgsA	2172141..2172683 (-)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
B1H24_RS11335 (B1H24_11335)	yfmH	2172806..2174089 (-)	1284	WP_000217765.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
B1H24_RS11340 (B1H24_11340)	yfmF	2174091..2175335 (-)	1245	WP_000706190.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
B1H24_RS11345 (B1H24_11345)	yaaA	2175574..2175927 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
B1H24_RS11350 (B1H24_11350)	recF	2175930..2177039 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
B1H24_RS11355 (B1H24_11355)	-	2177051..2177917 (-)	867	WP_000398683.1	GRP family sugar transporter	-
B1H24_RS11360 (B1H24_11360)	-	2177973..2178635 (-)	663	WP_001871057.1	helix-turn-helix domain-containing protein	-
B1H24_RS11365 (B1H24_11365)	guaB	2178710..2180191 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
B1H24_RS11370 (B1H24_11370)	-	2180348..2180833 (-)	486	WP_001034427.1	arginine repressor	-
B1H24_RS11375 (B1H24_11375)	-	2180843..2181523 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=182831 B1H24_RS11350 WP_000264870.1 2175930..2177039(+) (recF) [Streptococcus agalactiae strain Sag37]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=182831 B1H24_RS11350 WP_000264870.1 2175930..2177039(+) (recF) [Streptococcus agalactiae strain Sag37]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447