Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   AT729_RS01685 Genome accession   NZ_CP015886
Coordinates   287732..288427 (+) Length   231 a.a.
NCBI ID   WP_002234519.1    Uniprot ID   -
Organism   Neisseria meningitidis strain 38277     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 282732..293427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT729_RS01665 (AT729_00283) - 283355..283753 (+) 399 WP_079889345.1 DoxX family protein -
  AT729_RS01670 (AT729_00284) - 283802..284407 (+) 606 WP_002234517.1 nitroreductase family protein -
  AT729_RS01675 (AT729_00285) - 284593..286704 (+) 2112 WP_061370371.1 TonB-dependent receptor -
  AT729_RS01680 (AT729_00286) - 286902..287561 (+) 660 WP_002218694.1 NYN domain-containing protein -
  AT729_RS01685 (AT729_00287) dsbA2 287732..288427 (+) 696 WP_002234519.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  AT729_RS01690 (AT729_00288) ffh 288758..290128 (-) 1371 WP_079889346.1 signal recognition particle protein -
  AT729_RS01695 (AT729_00289) - 290349..291155 (+) 807 WP_002233490.1 inner membrane protein YpjD -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25447.95 Da        Isoelectric Point: 5.1502

>NTDB_id=182772 AT729_RS01685 WP_002234519.1 287732..288427(+) (dsbA2) [Neisseria meningitidis strain 38277]
MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAELNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=182772 AT729_RS01685 WP_002234519.1 287732..288427(+) (dsbA2) [Neisseria meningitidis strain 38277]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGTCCAAAGCAGCTCATCTGCTCCGGCAGCCCCTGCTGAGTTGAACGAAGGTGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATTGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

99.567

100

0.996

  dsbA1 Neisseria meningitidis MC58

70.815

100

0.714


Multiple sequence alignment