Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   B1K54_RS20660 Genome accession   NZ_CP019798
Coordinates   4586007..4587131 (-) Length   374 a.a.
NCBI ID   WP_078094836.1    Uniprot ID   -
Organism   Streptomyces sp. fd1-xmd     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4581007..4592131
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B1K54_RS20635 (B1K54_20625) - 4581737..4582393 (-) 657 WP_381785862.1 hypothetical protein -
  B1K54_RS20640 (B1K54_20630) - 4582429..4582995 (-) 567 WP_030763752.1 SigE family RNA polymerase sigma factor -
  B1K54_RS20645 (B1K54_20635) - 4583290..4584267 (-) 978 WP_107499904.1 A/G-specific adenine glycosylase -
  B1K54_RS20650 (B1K54_20640) - 4584264..4584941 (-) 678 WP_107499905.1 phosphatase PAP2 family protein -
  B1K54_RS20655 (B1K54_20645) - 4585165..4585905 (+) 741 WP_318658178.1 hypothetical protein -
  B1K54_RS20660 (B1K54_20650) disA 4586007..4587131 (-) 1125 WP_078094836.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  B1K54_RS20665 (B1K54_20655) radA/sms 4587399..4588817 (-) 1419 WP_030846144.1 DNA repair protein RadA Machinery gene
  B1K54_RS20670 (B1K54_20660) - 4588974..4590752 (+) 1779 WP_078094837.1 BACON domain-containing protein -
  B1K54_RS20675 (B1K54_20665) - 4590792..4591541 (-) 750 WP_051700214.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40347.33 Da        Isoelectric Point: 5.0260

>NTDB_id=182034 B1K54_RS20660 WP_078094836.1 4586007..4587131(-) (disA) [Streptomyces sp. fd1-xmd]
MAAKDGAAAPGKSGASSKHDALMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKAVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALAELDALTHPELLELPIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=182034 B1K54_RS20660 WP_078094836.1 4586007..4587131(-) (disA) [Streptomyces sp. fd1-xmd]
GTGGCAGCCAAGGACGGGGCAGCAGCACCCGGGAAGTCCGGCGCGAGCTCCAAGCACGACGCGCTCATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCACTGCGCGACGGCCTTGAGCGGATCGTCCGAGGCAACACCGGCGGCCTCATCGTCC
TCGGCATGGACAAGGCCGTCGAGGCGATGTGCACGGGCGGCTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAACTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACCTCACCAAGATCCTGCGGGCCGGCGTACAGCTCGTACC
GGACGCGTCGATCCCCACGGAGGAGACGGGCACGCGCCACCGCACGGCCGACCGCGTCTCGAAGCAGTGCGGCTTCCCGG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCCAACCAGGCGCTGGCCACCCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTGGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTGCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGACTGCTGTCCCTCCAGCTGGACGAGCTGACGGTG
GGGATCGAGCAGGAGCGCGAGCTGGTCATCCGGGACTACGTGCCCGAGCCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTGGCGGAGCTGGACGCGCTGACCCACCCGGAGCTGCTGGAACTGCCCATCGTGGCGCGGGCGCTGGGGTACACGG
GCTCGCCCGAGACGCTGGACTCGGCGGTGTCGCCCCGCGGCTACCGGCTGCTGGCGAAGGTGCCGAGGCTGCCGGGCGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTGCAGGCGGTGGA
CGGCGTGGGCGAGGCCCGCGCGCGGAGCGTCCGCGAGGGCCTGTCCCGTCTGGCCGAGTCGTCCATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444