Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   PS273GM_RS05105 Genome accession   NZ_CP015641
Coordinates   1141357..1141764 (-) Length   135 a.a.
NCBI ID   WP_045423724.1    Uniprot ID   A0A172WM91
Organism   Stutzerimonas stutzeri strain 273     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 1136357..1146764
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PS273GM_RS05085 (PS273GM_05085) - 1137317..1138183 (-) 867 WP_064482687.1 protein-glutamate O-methyltransferase -
  PS273GM_RS05090 (PS273GM_05090) - 1138244..1140292 (-) 2049 WP_045423730.1 methyl-accepting chemotaxis protein -
  PS273GM_RS05095 (PS273GM_05095) - 1140372..1140908 (-) 537 WP_045423728.1 chemotaxis protein CheW -
  PS273GM_RS05100 (PS273GM_05100) pilH 1140947..1141312 (-) 366 WP_045163991.1 twitching motility response regulator PilH -
  PS273GM_RS05105 (PS273GM_05105) pilG 1141357..1141764 (-) 408 WP_045423724.1 twitching motility response regulator PilG Regulator
  PS273GM_RS05110 (PS273GM_05110) gshB 1141999..1142958 (+) 960 WP_064480821.1 glutathione synthase -
  PS273GM_RS05115 (PS273GM_05115) - 1143118..1144014 (+) 897 WP_064480822.1 energy transducer TonB -
  PS273GM_RS05120 (PS273GM_05120) - 1144096..1144665 (+) 570 WP_045423718.1 YqgE/AlgH family protein -
  PS273GM_RS05125 (PS273GM_05125) ruvX 1144662..1145090 (+) 429 WP_064480823.1 Holliday junction resolvase RuvX -
  PS273GM_RS05130 (PS273GM_05130) pyrR 1145110..1145622 (+) 513 WP_064480824.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PS273GM_RS05135 (PS273GM_05135) - 1145633..1146649 (+) 1017 WP_046161612.1 aspartate carbamoyltransferase catalytic subunit -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14856.24 Da        Isoelectric Point: 7.2439

>NTDB_id=181643 PS273GM_RS05105 WP_045423724.1 1141357..1141764(-) (pilG) [Stutzerimonas stutzeri strain 273]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADSHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFSPVEQVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=181643 PS273GM_RS05105 WP_045423724.1 1141357..1141764(-) (pilG) [Stutzerimonas stutzeri strain 273]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCCGAAACGCTACT
GAAGAAAGTAGGTTGTGATGTGATCACGGCGGTGGATGGCTTCGATGCGCTTGCCAAGATCGCGGATAGTCACCCGCGCA
TCATCTTCGTCGATATCATGATGCCCAGGCTTGATGGTTATCAGACCTGCGCGCTGATCAAGAACAACAGTTCTTTCAAG
TCCACGCCGGTGATCATGCTGTCCTCGAAGGATGGTTTGTTTGACAAGGCCAAGGGGCGGATCGTGGGGTCGGACCAGTA
CCTCACCAAACCGTTCAGCAAAGAAGAGTTGCTCGGTGCTATCAAGGCCCATGTGCCGGATTTTTCACCGGTTGAGCAAG
TATCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A172WM91

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment