Detailed information NTG0181429

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: BSA171_RS03205
• Genome accession: NZ_CP015611
• Coordinates: 637811..638467 (+)
• Length: 218 a.a.
• NCBI ID: WP_231120176.1
• Uniprot ID: -
• Organism: Bacillus safensis strain U17-1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 632811..643467

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSA171_RS03180 (BSA171_03140)	degS	632936..634111 (+)	1176	WP_003213166.1	sensor histidine kinase	Regulator
BSA171_RS03185 (BSA171_03145)	degU	634176..634865 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
BSA171_RS03190 (BSA171_03150)	-	635081..635923 (+)	843	WP_041088038.1	DegV family protein	-
BSA171_RS03195 (BSA171_03155)	comFA	636044..637441 (+)	1398	WP_269199592.1	DEAD/DEAH box helicase	Machinery gene
BSA171_RS03200 (BSA171_03160)	-	637491..637784 (+)	294	WP_041088040.1	late competence development ComFB family protein	-
BSA171_RS03205 (BSA171_03165)	comFC	637811..638467 (+)	657	WP_231120176.1	ComF family protein	Machinery gene
BSA171_RS03210 (BSA171_03170)	-	638524..638943 (+)	420	WP_075611999.1	TIGR03826 family flagellar region protein	-
BSA171_RS03215 (BSA171_03175)	flgM	639023..639286 (+)	264	WP_075611998.1	flagellar biosynthesis anti-sigma factor FlgM	-
BSA171_RS03220 (BSA171_03180)	-	639305..639787 (+)	483	WP_075611997.1	flagellar protein FlgN	-
BSA171_RS03225 (BSA171_03185)	flgK	639803..641323 (+)	1521	WP_058837539.1	flagellar hook-associated protein FlgK	-
BSA171_RS03230 (BSA171_03190)	flgL	641333..642241 (+)	909	WP_041088047.1	flagellar hook-associated protein FlgL	-
BSA171_RS03235 (BSA171_03195)	-	642288..642866 (+)	579	WP_041088049.1	DUF6470 family protein	-
BSA171_RS03240 (BSA171_03200)	fliW	642895..643329 (+)	435	WP_075611996.1	flagellar assembly protein FliW	-

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 25008.16 Da
• Isoelectric Point: 10.1258

>NTDB_id=181429 BSA171_RS03205 WP_231120176.1 637811..638467(+) (comFC) [Bacillus safensis strain U17-1]
MPAFTWKSFLLLNDDRLCVACKNDLVKIERPICPTCGRAQSNDQMCQDCDRWNERPDSTKVLLKNRSVYTYNELMKDVLA
RFKFRGDTALVELFKRDVQAAFKHSFSKKEPLLIPIPLSHERLKERGFNQSVIIASLIGKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKHTDVIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=181429 BSA171_RS03205 WP_231120176.1 637811..638467(+) (comFC) [Bacillus safensis strain U17-1]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATGACTTAGTTAA
GATTGAGCGTCCTATTTGTCCAACGTGTGGAAGGGCGCAGTCAAATGACCAAATGTGCCAGGACTGTGATAGATGGAATG
AACGCCCTGATTCTACTAAAGTCCTTTTGAAAAATAGGTCAGTTTATACTTACAACGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGTTGAGCTGTTTAAACGAGATGTACAAGCAGCATTTAAACATTCCTTCAG
CAAAAAAGAACCATTGCTGATTCCGATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAACCAGTCCGTCATCA
TCGCTTCCTTGATAGGTAAGCCAATATTGCAGCCACTAGTGAAAATACATCAAAGTAAGCAGTCCAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATAAAGCATACAGATGTGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATTTATGATGCAGCAAGAATTTTAAAAGATGCAGGTGCCAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (131-216)

• Double zinc ribbon domain (DZR_2) (14-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	48.611	99.083	0.482
comFC/cflB	Streptococcus pneumoniae Rx1	38.14	98.624	0.376
comFC/cflB	Streptococcus pneumoniae D39	38.14	98.624	0.376
comFC/cflB	Streptococcus pneumoniae R6	38.14	98.624	0.376
comFC/cflB	Streptococcus pneumoniae TIGR4	38.14	98.624	0.376
comFC/cflB	Streptococcus mitis NCTC 12261	36.697	100	0.367
comFC/cflB	Streptococcus mitis SK321	37.209	98.624	0.367