Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BSA145_RS20100 Genome accession   NZ_CP015607
Coordinates   3850078..3850881 (-) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus safensis strain U14-5     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3845078..3855881
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSA145_RS20080 (BSA145_19650) - 3847284..3847520 (+) 237 WP_075623473.1 DUF2627 domain-containing protein -
  BSA145_RS20085 (BSA145_19655) - 3847556..3848293 (-) 738 WP_048239245.1 glycerophosphodiester phosphodiesterase -
  BSA145_RS20090 (BSA145_19660) - 3848521..3849621 (-) 1101 WP_075623474.1 RapH N-terminal domain-containing protein -
  BSA145_RS20095 (BSA145_19665) - 3849609..3849806 (-) 198 WP_024422934.1 hypothetical protein -
  BSA145_RS20100 (BSA145_19670) spo0A 3850078..3850881 (-) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  BSA145_RS20105 (BSA145_19675) spoIVB 3851167..3852444 (-) 1278 WP_041106823.1 SpoIVB peptidase -
  BSA145_RS20110 (BSA145_19680) recN 3852644..3854377 (-) 1734 WP_034280267.1 DNA repair protein RecN Machinery gene
  BSA145_RS20115 (BSA145_19685) ahrC 3854411..3854860 (-) 450 WP_024422938.1 transcriptional regulator AhrC/ArgR -
  BSA145_RS20120 (BSA145_19690) - 3855024..3855878 (-) 855 WP_075623475.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=181351 BSA145_RS20100 WP_024422935.1 3850078..3850881(-) (spo0A) [Bacillus safensis strain U14-5]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=181351 BSA145_RS20100 WP_024422935.1 3850078..3850881(-) (spo0A) [Bacillus safensis strain U14-5]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTACATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGCCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGACATTATTATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACAAAACAG
CCAAGTGTGATTATGCTAACGGCATTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGCGCATCCTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCAATCCAAAACAGTGTTCTTCGTAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATT
ATTCATGAGATTGGCGTGCCCGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCGATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATTACTAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACTGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTCGCTTGGAGCAGAGGAAACATTGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCAAAACCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTTTGCGATTAGAGCATAGAGCAAG
CTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884

Multiple sequence alignment