Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   BSA145_RS16150 Genome accession   NZ_CP015607
Coordinates   3089195..3090097 (+) Length   300 a.a.
NCBI ID   WP_075623027.1    Uniprot ID   A0A1L6ZL19
Organism   Bacillus safensis strain U14-5     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3084195..3095097
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSA145_RS16130 (BSA145_15790) - 3084861..3086597 (+) 1737 WP_075623025.1 glycosyltransferase -
  BSA145_RS16135 (BSA145_15795) - 3086594..3086869 (+) 276 WP_003211418.1 FlhB-like flagellar biosynthesis protein -
  BSA145_RS16140 (BSA145_15800) sucC 3087046..3088206 (+) 1161 WP_075623026.1 ADP-forming succinate--CoA ligase subunit beta -
  BSA145_RS16145 (BSA145_15805) sucD 3088229..3089131 (+) 903 WP_007499624.1 succinate--CoA ligase subunit alpha -
  BSA145_RS16150 (BSA145_15810) dprA 3089195..3090097 (+) 903 WP_075623027.1 DNA-processing protein DprA Machinery gene
  BSA145_RS16155 (BSA145_15815) topA 3090291..3092366 (+) 2076 WP_075623028.1 type I DNA topoisomerase -
  BSA145_RS16160 (BSA145_15820) trmFO 3092437..3093741 (+) 1305 WP_024424183.1 FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO -
  BSA145_RS16165 (BSA145_15825) xerC 3093804..3094721 (+) 918 WP_048239697.1 tyrosine recombinase XerC -

Sequence

Protein


Download         Length: 300 a.a.        Molecular weight: 34125.59 Da        Isoelectric Point: 9.1119

>NTDB_id=181345 BSA145_RS16150 WP_075623027.1 3089195..3090097(+) (dprA) [Bacillus safensis strain U14-5]
MYNVSERMIFHRLKGLISPSLLIKWWKVDPELYINEETHHFKQDRALQTIDFTRLKQAEENEFPIFQHIVQAYLKQNIHM
IPITSPLYPSTLKNIYDPPPVLFLKGNVSYLNEEKSLGVVGTRVPSSYGEACVKKIVGELVKEEWMIVSGLAKGIDGLAH
KECIRKKGKTIGIIAGGFQHLYPKEHAQMAQYMGEHHLLLSEHPPYVKPEKWHFPMRNRLISALTKGTIVIQCKEKSGSL
ITAYQALEQGKEVFAVAGSIFDPNSTGPARLIQQGAKLVHSTKDILEEFSFRSVQYTELS

Nucleotide


Download         Length: 903 bp        

>NTDB_id=181345 BSA145_RS16150 WP_075623027.1 3089195..3090097(+) (dprA) [Bacillus safensis strain U14-5]
ATGTACAACGTGTCCGAAAGAATGATTTTTCACCGCTTAAAAGGCCTCATCTCACCCTCATTATTAATAAAATGGTGGAA
AGTCGATCCTGAACTATATATAAATGAAGAAACACATCATTTTAAACAGGATCGAGCATTACAAACGATCGACTTTACCC
GCTTAAAACAAGCTGAAGAAAATGAATTCCCCATTTTTCAACACATCGTTCAAGCCTATTTAAAGCAAAACATTCACATG
ATTCCCATCACATCACCCTTATATCCCAGCACACTAAAAAATATTTATGATCCTCCCCCTGTGTTATTCCTAAAAGGAAA
CGTATCATATTTAAATGAAGAAAAAAGTTTAGGTGTAGTCGGCACACGAGTTCCATCGTCTTATGGAGAAGCATGTGTGA
AAAAAATTGTTGGTGAGCTTGTCAAGGAAGAGTGGATGATTGTCAGTGGTCTAGCTAAAGGAATCGATGGACTTGCACAT
AAAGAGTGCATCAGGAAAAAAGGGAAAACAATCGGCATTATCGCAGGCGGCTTTCAGCATTTATACCCAAAAGAGCATGC
ACAAATGGCTCAATACATGGGCGAGCATCATTTGCTTTTGTCAGAGCATCCGCCTTATGTCAAACCAGAAAAGTGGCATT
TCCCAATGAGAAATCGTTTAATTAGTGCATTGACGAAAGGAACCATCGTGATTCAGTGCAAAGAAAAGAGCGGTTCTCTT
ATTACAGCCTATCAAGCACTTGAGCAAGGAAAAGAAGTATTTGCGGTTGCCGGATCCATCTTTGATCCTAATTCCACAGG
GCCGGCAAGACTCATTCAGCAGGGGGCAAAGCTTGTTCATTCCACAAAGGATATTTTAGAGGAATTCTCCTTCCGCAGCG
TTCAATATACTGAACTCTCATAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(75-280)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1L6ZL19

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Bacillus subtilis subsp. subtilis str. 168

55.052

95.667

0.527
  dprA Legionella pneumophila strain ERS1305867

38.033

100

0.387
  dprA Lactococcus lactis subsp. cremoris KW2

37.847

96

0.363

Multiple sequence alignment