Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   BSA145_RS05865 Genome accession   NZ_CP015607
Coordinates   1107572..1108213 (+) Length   213 a.a.
NCBI ID   WP_024423322.1    Uniprot ID   A0AAP7QNQ1
Organism   Bacillus safensis strain U14-5     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1102572..1113213
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSA145_RS05840 (BSA145_05730) - 1102958..1103314 (-) 357 WP_081385844.1 inner spore coat protein -
  BSA145_RS05845 (BSA145_05735) degQ 1103820..1103960 (+) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  BSA145_RS05850 (BSA145_05740) - 1104112..1105035 (+) 924 WP_075621894.1 polyprenyl synthetase family protein -
  BSA145_RS05855 (BSA145_05745) comX 1105013..1105186 (+) 174 WP_041107629.1 competence pheromone ComX -
  BSA145_RS05860 (BSA145_05750) comP 1105200..1107491 (+) 2292 WP_075621895.1 ATP-binding protein Regulator
  BSA145_RS05865 (BSA145_05755) comA 1107572..1108213 (+) 642 WP_024423322.1 response regulator transcription factor Regulator
  BSA145_RS05870 (BSA145_05760) - 1108237..1108626 (+) 390 WP_075621896.1 hotdog fold thioesterase -
  BSA145_RS05875 (BSA145_05765) mnhG 1108719..1109093 (-) 375 WP_024423320.1 monovalent cation/H(+) antiporter subunit G -
  BSA145_RS05880 (BSA145_05770) - 1109077..1109358 (-) 282 WP_024425942.1 Na(+)/H(+) antiporter subunit F1 -
  BSA145_RS05885 (BSA145_05775) - 1109358..1109837 (-) 480 WP_041107627.1 Na+/H+ antiporter subunit E -
  BSA145_RS05890 (BSA145_05780) - 1109844..1111322 (-) 1479 WP_041107626.1 Na+/H+ antiporter subunit D -
  BSA145_RS05895 (BSA145_05785) - 1111315..1111656 (-) 342 WP_024423316.1 Na(+)/H(+) antiporter subunit C -
  BSA145_RS05900 (BSA145_05790) - 1111656..1112087 (-) 432 WP_024423315.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24149.54 Da        Isoelectric Point: 4.6344

>NTDB_id=181317 BSA145_RS05865 WP_024423322.1 1107572..1108213(+) (comA) [Bacillus safensis strain U14-5]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEAAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNHQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQQTDHDLLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=181317 BSA145_RS05865 WP_024423322.1 1107572..1108213(+) (comA) [Bacillus safensis strain U14-5]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGACCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGCCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATTTTAA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCGAAACAAATTTTAGAAACCAACCATCAAGTGAAAATTATC
ATTTATACAGGGTATGAAGTAGATGATTATTTTGAAGAGGCTATTCGGGCTGGATTACACGGTGCAATTAGCAAAACAGA
GACGAAAGACAAAATTATTGAATACATACACCGCACATTACAAGGAGAAGTTGTCATTCAGCTGTCTTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAAAAGCCAGAACAGGCACAGCAGACTGATCACGACCTCTTAACCGAACGGGAGTGTTTGATC
CTTAGAGAAGTAGAAAAAGGATACACGAACCAGGAGATTGCCGATGTGCTTCATTTGAGCAAACGGTCAATTGAGTACAG
TTTGACATCCATCTTTAATAAGCTGAATGTTGGATCTCGTACAGAAGCGGTGTTAATTGCCAAGTCTGAAAGTGTGCTGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.963

100

0.723

Multiple sequence alignment