Detailed information    

insolico Bioinformatically predicted

Overview


Name   degQ   Type   Regulator
Locus tag   BSA145_RS05845 Genome accession   NZ_CP015607
Coordinates   1103820..1103960 (+) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus safensis strain U14-5     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1098820..1108960
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSA145_RS05820 (BSA145_05710) - 1099049..1099456 (+) 408 WP_075621892.1 YueI family protein -
  BSA145_RS05825 (BSA145_05715) - 1099517..1100068 (+) 552 WP_024425949.1 cysteine hydrolase family protein -
  BSA145_RS05830 (BSA145_05720) - 1100086..1101558 (+) 1473 WP_024423327.1 nicotinate phosphoribosyltransferase -
  BSA145_RS05835 (BSA145_05725) - 1101696..1102922 (+) 1227 WP_075621893.1 EAL and HDOD domain-containing protein -
  BSA145_RS05840 (BSA145_05730) - 1102958..1103314 (-) 357 WP_081385844.1 inner spore coat protein -
  BSA145_RS05845 (BSA145_05735) degQ 1103820..1103960 (+) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  BSA145_RS05850 (BSA145_05740) - 1104112..1105035 (+) 924 WP_075621894.1 polyprenyl synthetase family protein -
  BSA145_RS05855 (BSA145_05745) comX 1105013..1105186 (+) 174 WP_041107629.1 competence pheromone ComX -
  BSA145_RS05860 (BSA145_05750) comP 1105200..1107491 (+) 2292 WP_075621895.1 ATP-binding protein Regulator
  BSA145_RS05865 (BSA145_05755) comA 1107572..1108213 (+) 642 WP_024423322.1 response regulator transcription factor Regulator
  BSA145_RS05870 (BSA145_05760) - 1108237..1108626 (+) 390 WP_075621896.1 hotdog fold thioesterase -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=181315 BSA145_RS05845 WP_003213123.1 1103820..1103960(+) (degQ) [Bacillus safensis strain U14-5]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=181315 BSA145_RS05845 WP_003213123.1 1103820..1103960(+) (degQ) [Bacillus safensis strain U14-5]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAATTATTATGGAAACTTGAAAACGAAATCAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains


Predicted by InterproScan.

(1-46)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696


Multiple sequence alignment