Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   BWR56_RS07930 Genome accession   NZ_CP019562
Coordinates   1614798..1615847 (-) Length   349 a.a.
NCBI ID   WP_049505126.1    Uniprot ID   A0ABU5G3H5
Organism   Streptococcus oralis strain S.MIT/ORALIS-351     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1609798..1620847
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWR56_RS07900 (BWR56_1567) - 1610226..1610894 (-) 669 WP_049505117.1 CPBP family intramembrane glutamic endopeptidase -
  BWR56_RS07905 - 1611173..1611529 (-) 357 WP_049505118.1 hypothetical protein -
  BWR56_RS07910 (BWR56_1568) - 1611598..1612947 (-) 1350 WP_049505119.1 sensor histidine kinase -
  BWR56_RS07915 (BWR56_1569) comE/blpR 1612961..1613698 (-) 738 WP_049505121.1 response regulator transcription factor Regulator
  BWR56_RS07920 (BWR56_1570) - 1613703..1614041 (-) 339 WP_049505123.1 LytTR family DNA-binding domain-containing protein -
  BWR56_RS07925 (BWR56_1571) - 1614320..1614649 (+) 330 WP_049505124.1 hypothetical protein -
  BWR56_RS07930 (BWR56_1572) pptB 1614798..1615847 (-) 1050 WP_049505126.1 ABC transporter permease Regulator
  BWR56_RS07935 (BWR56_1573) pptA 1615844..1616575 (-) 732 WP_049505127.1 ABC transporter ATP-binding protein Regulator
  BWR56_RS07940 (BWR56_1574) - 1616643..1617053 (+) 411 WP_001278305.1 HIT family protein -
  BWR56_RS07945 (BWR56_1575) - 1617063..1617350 (+) 288 WP_049505129.1 hypothetical protein -
  BWR56_RS07955 (BWR56_1576) dnaJ 1617792..1618928 (-) 1137 WP_049505132.1 molecular chaperone DnaJ -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 40488.51 Da        Isoelectric Point: 10.0070

>NTDB_id=180972 BWR56_RS07930 WP_049505126.1 1614798..1615847(-) (pptB) [Streptococcus oralis strain S.MIT/ORALIS-351]
MKDLFLKRKQAFRKECVGYLRYVLNDHFVLFLLVLIGFLAYQYSQLLQDFPYNHWPILLFLGIVSALLLAWGGIATYMEG
PDKLFLLVSEEEVKSYLKGQSSRSFVFWTIVQTLFLLLFAPLFLAMGYGLPVFLVYVLLLGVAKYLLFRQKASKFFTETG
LDWDYVIAQESKRKQILLRFFALFTQVKGVSNSVKRRAYLDFILKAVQKVPSKIWQNLYLRSYLRNGDLFALSLRLLFLS
LLALVFIEQAWIATAVVVLFNYLMLFQLLALYRAFDYQYLTQLFPLEKGEKEKGLQEVIRGLTGFVLLVQLIVGLITLQE
KLALLALLGAGLVLQILYLPYRVKHQMQD

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=180972 BWR56_RS07930 WP_049505126.1 1614798..1615847(-) (pptB) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGAAAGACTTGTTTTTAAAGCGAAAGCAGGCTTTTCGCAAGGAGTGTGTCGGTTATCTGCGTTATGTTCTCAATGATCA
CTTTGTCTTATTCCTGCTGGTTCTCATCGGTTTTCTAGCCTACCAGTACAGTCAACTCTTGCAAGATTTTCCTTATAATC
ATTGGCCCATCCTCTTGTTTTTGGGGATTGTATCTGCCTTGCTTTTGGCTTGGGGAGGAATCGCGACCTACATGGAAGGA
CCTGACAAGCTCTTTCTCTTAGTCAGTGAAGAGGAGGTGAAGTCCTACCTAAAAGGACAGTCGTCGCGTTCATTTGTTTT
CTGGACAATTGTCCAAACCCTCTTTTTACTCTTATTTGCACCTTTGTTTTTAGCTATGGGCTATGGCTTGCCAGTCTTTC
TCGTCTATGTGCTTTTATTGGGAGTAGCGAAGTACCTCCTCTTTCGCCAAAAAGCCAGCAAATTTTTCACTGAAACTGGG
CTGGACTGGGATTATGTCATTGCCCAAGAAAGCAAGCGCAAGCAAATTCTGCTTCGTTTCTTTGCTCTCTTTACTCAGGT
TAAGGGCGTTTCCAATAGTGTCAAACGTCGCGCTTATCTGGATTTTATCCTTAAAGCAGTTCAGAAAGTGCCGAGCAAGA
TTTGGCAAAACCTCTATCTTCGTTCTTATCTGCGAAATGGAGATCTCTTTGCCCTCAGTCTCCGTCTCCTCTTCCTATCC
TTGTTAGCTCTAGTCTTTATCGAGCAAGCTTGGATTGCGACGGCAGTGGTTGTCCTGTTTAATTACCTTATGCTCTTCCA
GTTGTTGGCTCTCTATCGTGCTTTCGACTACCAGTACTTGACCCAGCTCTTTCCATTAGAAAAAGGGGAGAAAGAGAAGG
GACTACAGGAAGTTATCCGAGGATTGACAGGTTTTGTTTTATTGGTTCAGCTGATAGTTGGTTTGATTACCCTCCAAGAA
AAACTAGCTCTTCTAGCCCTGCTTGGAGCTGGACTGGTCCTGCAAATCTTGTATCTCCCTTATCGGGTGAAACATCAGAT
GCAGGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

47.143

100

0.473

  pptB Streptococcus thermophilus LMD-9

46.571

100

0.467


Multiple sequence alignment