Detailed information    

insolico Bioinformatically predicted

Overview


Name   hexA   Type   Machinery gene
Locus tag   BWR56_RS00815 Genome accession   NZ_CP019562
Coordinates   163659..166193 (+) Length   844 a.a.
NCBI ID   WP_076984271.1    Uniprot ID   -
Organism   Streptococcus oralis strain S.MIT/ORALIS-351     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 158659..171193
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWR56_RS00790 (BWR56_0152) nrdI 158727..159197 (+) 471 WP_070837149.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  BWR56_RS00795 (BWR56_0153) - 159279..160541 (-) 1263 WP_076984269.1 NRAMP family divalent metal transporter -
  BWR56_RS00800 (BWR56_0154) - 160740..160985 (-) 246 WP_076984270.1 MarR family transcriptional regulator -
  BWR56_RS00805 (BWR56_0155) argS 161316..163007 (-) 1692 WP_049478944.1 arginine--tRNA ligase -
  BWR56_RS00810 (BWR56_0156) argR 163162..163608 (+) 447 WP_001231483.1 arginine repressor -
  BWR56_RS00815 (BWR56_0157) hexA 163659..166193 (+) 2535 WP_076984271.1 DNA mismatch repair protein MutS Machinery gene
  BWR56_RS00820 (BWR56_0158) - 166235..166693 (-) 459 WP_070695986.1 DUF3021 domain-containing protein -
  BWR56_RS00825 (BWR56_0159) - 166690..167130 (-) 441 WP_076984272.1 LytTR family DNA-binding domain-containing protein -
  BWR56_RS00835 (BWR56_0160) hexB 167339..169288 (+) 1950 WP_065371519.1 DNA mismatch repair endonuclease MutL Machinery gene
  BWR56_RS00840 (BWR56_0161) - 169429..169926 (-) 498 WP_065371520.1 helix-turn-helix domain-containing protein -

Sequence


Protein


Download         Length: 844 a.a.        Molecular weight: 94666.07 Da        Isoelectric Point: 4.8297

>NTDB_id=180904 BWR56_RS00815 WP_076984271.1 163659..166193(+) (hexA) [Streptococcus oralis strain S.MIT/ORALIS-351]
MATEKLSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAINAAQILEISLTSRNKNAENPIPMAGVPYHSAQQYIDVLI
EQGYKVAIAEQMEDPKQAVGVVKREVVQVITPGTVVDSSKPDSQNNFLVSLDCDGNQFGLAYMDLVTGDFYVTGLLDFTL
VCGEVRNLKAREVVLGYNLSEEEEQILSRQMNLVLSYEKEGFEDIHLLDSRLAAVEQAAASKLLQYVHRTQMRELNHLKP
VIRYEIKDFLQMDFATKASLDLVENARSGKKQGSLFWLLDETKTAMGMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFF
ERSDLTDSLKGVYDIERLASRVSFGKTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIEQLDAIPELESLISAAIAP
EAPHVITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKA
TLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQSLAVVAETQHLIRPEFG
DDSQIDIQKGRHAVVEKVMGAQTYIPNSIQMAEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDA
IFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGTATYDGMALAQSIIEYIHEHIGAKTLFATHYHEL
TSLESSLEHLVNVHVATLEQNGQVTFLHKIEPGPADKSYGIHVAKIAGLPAELLARADKILTQLENQGTESPAPMRETSD
VTEQMSLFDAPAEHPILAELVKLDVYNMTPMQAMNVLVELKQKL

Nucleotide


Download         Length: 2535 bp        

>NTDB_id=180904 BWR56_RS00815 WP_076984271.1 163659..166193(+) (hexA) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGGCAACAGAAAAGCTATCACCCGGCATGCAACAGTATGTGGATATTAAGAAACAATACCCAGATGCTTTTTTGCTTTT
TCGAATGGGTGATTTTTACGAGTTGTTCTATGAAGATGCAATTAATGCAGCACAGATTTTAGAAATTTCCTTAACGAGTC
GGAATAAAAATGCAGAAAATCCGATACCTATGGCGGGCGTCCCCTATCATTCTGCCCAACAGTATATCGATGTTCTGATT
GAGCAGGGCTATAAGGTAGCCATAGCCGAGCAGATGGAAGATCCCAAACAAGCAGTTGGTGTTGTCAAGCGAGAGGTGGT
CCAGGTCATCACACCTGGAACGGTCGTTGATAGCAGTAAGCCGGATAGTCAGAATAATTTCTTGGTTTCCTTAGATTGTG
ATGGCAATCAATTTGGTCTGGCTTATATGGATTTGGTGACGGGTGACTTTTATGTGACGGGGCTATTGGATTTCACGTTG
GTTTGTGGGGAAGTCCGTAACCTCAAGGCGCGAGAAGTGGTGCTGGGTTATAACTTGTCTGAGGAAGAAGAACAAATCCT
CAGCCGTCAGATGAATCTGGTGCTTTCTTATGAGAAGGAAGGCTTTGAGGATATTCATTTACTAGATTCACGTTTGGCAG
CTGTGGAGCAAGCGGCAGCTAGTAAGCTGCTCCAGTATGTTCACCGGACCCAGATGCGGGAATTGAACCATCTCAAACCA
GTTATCCGCTATGAAATCAAAGATTTCTTACAGATGGACTTTGCGACCAAGGCTAGTCTGGATTTGGTTGAGAATGCCCG
TTCAGGTAAGAAGCAAGGGAGTCTTTTCTGGCTTTTGGATGAAACCAAAACAGCTATGGGCATGCGGCTCTTGCGTTCTT
GGATTCATCGTCCTTTGATTGATAAGGAGCGAATCGTCCAACGTCAAGAGGTGGTGCAGGTCTTTCTTGACCATTTCTTT
GAGCGTAGTGATTTAACGGATAGCCTCAAGGGTGTTTATGACATCGAACGCTTGGCTAGTCGGGTTTCTTTTGGCAAGAC
CAATCCCAAGGATCTCTTACAGTTAGCGACCACCTTGTCTAGTGTGCCACGGATTCGTGCGATTTTAGAGGGAATGGAGC
AACCTGCTCTAGCCTATCTCATCGAACAGTTGGATGCCATTCCTGAGTTGGAGAGCTTGATTAGTGCAGCGATTGCTCCT
GAAGCTCCTCATGTGATTACGGAAGGTGGTATTATCCGGACTGGATTTGATGAAACCTTGGATAAATACCGTCGAGTGCT
CAGAGAAGGGACCAGTTGGATTGCTGAGATTGAGGCTAAGGAGCGAGAAAACTCTGGTATCAGCACGCTTAAGATTGACT
ACAATAAAAAGGATGGCTACTATTTCCATGTGACTAATTCGCAACTGGGAAATGTGCCAGCCCACTTTTTCCGCAAGGCG
ACGTTGAAAAATTCGGAACGCTTTGGTACCGAGGAATTAGCCCGTATCGAGGGAGATATGCTGGAGGCGCGCGAGAAGTC
AGCCAACCTAGAATATGAAATCTTTATGCGTATCCGTGAGGAAGTCAGCAAGTACATCCAGCGTTTGCAGGCTCTAGCCC
AAGGAATTGCAACGGTTGATGTCTTGCAAAGTCTAGCAGTTGTGGCTGAAACCCAGCATTTGATCCGACCTGAGTTTGGA
GACGATTCACAAATTGATATCCAGAAAGGGCGCCATGCTGTCGTCGAAAAGGTCATGGGAGCTCAGACCTATATTCCAAA
TAGTATCCAGATGGCAGAAGATACGAGTATTCAGCTAATTACAGGGCCCAACATGAGTGGGAAGTCAACCTACATGCGCC
AGTTAGCCATGACTGCGGTTATGGCCCAGCTGGGTTCTTATGTGCCGGCAGAAAGCGCCCATTTGCCGATCTTCGATGCC
ATCTTTACCCGTATCGGAGCAGCAGATGACTTGGTTTCAGGTCAATCAACCTTCATGGTGGAGATGATGGAGGCCAACAA
TGCCATTTCGCATGCGACCAAGGATTCCTTGATTCTCTTTGATGAATTGGGACGCGGAACTGCAACTTATGACGGGATGG
CTCTTGCTCAATCCATCATCGAATACATCCATGAACATATCGGAGCCAAAACCCTCTTTGCTACCCACTACCATGAGCTG
ACCAGTCTGGAGTCTAGCTTGGAACACTTGGTCAATGTCCACGTGGCAACCTTGGAGCAGAATGGGCAGGTCACCTTCCT
TCACAAGATCGAGCCAGGACCAGCTGACAAATCCTATGGTATTCACGTTGCTAAGATTGCTGGCTTGCCAGCAGAACTTT
TAGCAAGGGCGGATAAGATATTGACTCAACTGGAGAATCAAGGGACGGAAAGTCCTGCTCCGATGAGAGAAACAAGTGAT
GTTACTGAACAGATGTCACTTTTTGACGCGCCTGCAGAGCATCCTATCCTAGCAGAATTAGTTAAACTGGATGTTTACAA
TATGACACCTATGCAGGCTATGAATGTCTTGGTCGAGCTCAAACAAAAGTTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexA Streptococcus pneumoniae R6

95.735

100

0.957

  mutS Pseudomonas stutzeri strain ATCC 17587

36.799

100

0.373


Multiple sequence alignment