Detailed information NTG0180895

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BWR56_RS00085
• Genome accession: NZ_CP019562
• Coordinates: 17495..18586 (-)
• Length: 363 a.a.
• NCBI ID: WP_049505026.1
• Uniprot ID: A0ABU5FZ60
• Organism: Streptococcus oralis strain S.MIT/ORALIS-351
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 12495..23586

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BWR56_RS00070 (BWR56_0014)	-	12951..14573 (-)	1623	WP_000958793.1	ATP-binding cassette domain-containing protein	-
BWR56_RS00075 (BWR56_0015)	trpS	14769..15794 (+)	1026	WP_049505024.1	tryptophan--tRNA ligase	-
BWR56_RS00080 (BWR56_0016)	guaB	15957..17435 (+)	1479	WP_000073406.1	IMP dehydrogenase	-
BWR56_RS00085 (BWR56_0017)	recF	17495..18586 (-)	1092	WP_049505026.1	DNA replication/repair protein RecF	Machinery gene
BWR56_RS00090 (BWR56_0018)	yaaA	18589..18957 (-)	369	WP_049505027.1	S4 domain-containing protein YaaA	-
BWR56_RS00095 (BWR56_0019)	yfmF	19118..20368 (+)	1251	WP_049505029.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
BWR56_RS00100 (BWR56_0020)	yfmH	20365..21648 (+)	1284	WP_049505032.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
BWR56_RS00105 (BWR56_0021)	rodZ	21684..22505 (+)	822	WP_049505033.1	cytoskeleton protein RodZ	-
BWR56_RS00110 (BWR56_0022)	pgsA	22516..23061 (+)	546	WP_049505035.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 363 a.a.
• Molecular weight: 41741.83 Da
• Isoelectric Point: 9.0545

>NTDB_id=180895 BWR56_RS00085 WP_049505026.1 17495..18586(-) (recF) [Streptococcus oralis strain S.MIT/ORALIS-351]
MWLQHLTIKTFRNYKEAKIDFNPKLNVFLGQNAQGKTNILEAIYFLALTRSHRTRTDKNLIHFDNEQLHLSGLLQKKTSS
IPLEIDLTPKGRVTKVNHLKQARLSDYIGHMNVVLFAPEDLQLIKGSPSVRRKFIDIELGQIKPIYLSDLSNYNHILKQR
NTYLKSSQKIDDTFLSVLDDQLVEYGCRVIKHRIKFIKDLEKFGQKKHLEISNELEELSISYQSSVNFTNEEQLTNSFKI
ALEKSRSRDLFKKNTGVGPHRDDIAFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITNESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFNIQNGKISVN

Nucleotide

• Length: 1092 bp

>NTDB_id=180895 BWR56_RS00085 WP_049505026.1 17495..18586(-) (recF) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGTGGCTCCAACATTTAACAATTAAAACCTTTCGAAACTACAAAGAGGCAAAAATTGATTTCAATCCAAAATTAAATGT
CTTTCTAGGTCAAAATGCACAAGGAAAAACCAATATTCTAGAAGCAATCTATTTCTTAGCCTTGACACGTAGTCATCGGA
CTCGTACAGATAAAAATCTCATTCATTTTGATAACGAGCAACTCCATCTTTCTGGCTTGCTACAGAAAAAAACAAGCTCT
ATCCCTCTAGAAATTGATTTAACGCCAAAAGGGCGTGTGACTAAGGTCAATCACTTAAAACAAGCTCGCCTATCAGACTA
CATCGGTCATATGAATGTTGTCCTCTTCGCACCTGAAGATCTCCAGCTAATTAAAGGATCACCTTCTGTCCGTCGAAAAT
TTATCGACATCGAACTGGGACAAATTAAACCAATCTACTTGTCAGACTTGTCAAACTATAATCACATACTCAAACAGAGA
AATACCTACCTAAAATCCAGCCAGAAGATTGACGATACATTTCTGTCAGTCTTAGACGATCAGCTAGTAGAGTATGGGTG
TCGTGTTATAAAGCATCGGATAAAATTCATTAAAGACTTAGAGAAATTTGGTCAAAAAAAACACTTAGAAATTTCAAATG
AATTAGAAGAGCTGTCAATATCTTATCAATCATCTGTCAACTTCACCAATGAAGAACAGCTAACAAATTCTTTTAAAATT
GCTTTGGAGAAAAGCCGATCCAGAGACTTATTTAAAAAGAATACTGGAGTTGGTCCTCATCGAGATGACATTGCTTTTTA
TATCAATGGAATGGATGCTAGTTTTGGAAGCCAAGGGCAACATCGTAGTCTTGTACTTTCTATCAAACTAGCAGAGATTG
AACTAATGGAAAGCATTACTAACGAGTCTCCAATACTCTTGCTTGATGATGTTATGAGCGAACTTGACAACACACGACAA
TTAAAATTACTAGAAACTATTTCACAATCTATCCAAACCTTCATCACAACAACAAGTTTAGACCACTTACAAAACTTGCC
AGAAAATCTTAGTATTTTCAACATCCAAAACGGTAAAATATCTGTAAATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	88.705	100	0.887
recF	Bacillus subtilis subsp. subtilis str. 168	46.196	100	0.468