Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   A6M16_RS09315 Genome accession   NZ_CP015557
Coordinates   1896449..1897708 (-) Length   419 a.a.
NCBI ID   WP_024395689.1    Uniprot ID   -
Organism   Streptococcus suis strain DN13     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1891449..1902708
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6M16_RS09295 (A6M16_09300) - 1891787..1892497 (+) 711 WP_063725379.1 MIP/aquaporin family protein -
  A6M16_RS10860 - 1892755..1894106 (+) 1352 WP_105105193.1 IS3 family transposase -
  A6M16_RS09310 (A6M16_09315) - 1894162..1896024 (-) 1863 WP_024395688.1 proline--tRNA ligase -
  A6M16_RS09315 (A6M16_09320) eeP 1896449..1897708 (-) 1260 WP_024395689.1 RIP metalloprotease RseP Regulator
  A6M16_RS09320 (A6M16_09325) - 1897718..1898524 (-) 807 WP_014638692.1 phosphatidate cytidylyltransferase -
  A6M16_RS09325 (A6M16_09330) - 1898534..1899289 (-) 756 WP_013730586.1 isoprenyl transferase -
  A6M16_RS09330 (A6M16_09335) yajC 1899403..1899726 (-) 324 WP_013730587.1 preprotein translocase subunit YajC -
  A6M16_RS09335 (A6M16_09340) - 1899836..1901128 (-) 1293 WP_002937782.1 adenylosuccinate synthase -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 44887.24 Da        Isoelectric Point: 5.6974

>NTDB_id=180697 A6M16_RS09315 WP_024395689.1 1896449..1897708(-) (eeP) [Streptococcus suis strain DN13]
MKGILAFVFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFILLFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVIAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=180697 A6M16_RS09315 WP_024395689.1 1896449..1897708(-) (eeP) [Streptococcus suis strain DN13]
ATGAAGGGAATTTTAGCATTTGTATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTTGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCCTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGGACAGAAGTTCGGATTGCTCCACTTGATGTTCAATAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGGATTCTAGTATT
TATTCTTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGTAAAGCAGCAACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTCGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTATTGCTGAACAAGTAGATGGGGCCTATCGAATAGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCAACAGCTCTTAGGGTTGTAACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCGGCTGAATTTGGTTTGGTTTCTGTGTT
GGGGCTAATGGCTGCACTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-405)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

65

100

0.652
  eeP Streptococcus thermophilus LMG 18311

65

100

0.652

Multiple sequence alignment