Detailed information NTG0180370

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: A6K30_RS03565
• Genome accession: NZ_CP015528
• Coordinates: 709297..710034 (-)
• Length: 245 a.a.
• NCBI ID: WP_002780246.1
• Uniprot ID: A0A5T1L8T6
• Organism: Campylobacter coli strain YH501
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 704297..715034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6K30_RS03525 (A6K30_03525)	-	704410..705171 (+)	762	WP_025431509.1	ATP-binding protein	-
A6K30_RS03530 (A6K30_03530)	-	705168..705851 (+)	684	WP_002777124.1	3-methyladenine DNA glycosylase	-
A6K30_RS03535 (A6K30_03535)	thiD	705851..706663 (+)	813	WP_002797568.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
A6K30_RS03540 (A6K30_03540)	thiE	706653..707285 (+)	633	WP_002777120.1	thiamine phosphate synthase	-
A6K30_RS03545 (A6K30_03545)	-	707263..707892 (+)	630	WP_063651994.1	uroporphyrinogen-III synthase	-
A6K30_RS03550 (A6K30_03550)	-	707885..708337 (-)	453	WP_032685939.1	hypothetical protein	-
A6K30_RS03555 (A6K30_03555)	-	708334..709002 (-)	669	WP_002783356.1	hypothetical protein	-
A6K30_RS03560 (A6K30_03560)	-	708995..709300 (-)	306	WP_002790525.1	hypothetical protein	-
A6K30_RS03565 (A6K30_03565)	proC	709297..710034 (-)	738	WP_002780246.1	pyrroline-5-carboxylate reductase	Machinery gene
A6K30_RS03570 (A6K30_03570)	fliW	710034..710423 (-)	390	WP_002777093.1	flagellar assembly protein FliW	-
A6K30_RS03575 (A6K30_03575)	-	710587..711234 (+)	648	WP_002777091.1	outer membrane protein assembly factor BamD	-
A6K30_RS03580 (A6K30_03580)	lon	711250..713626 (+)	2377	Protein_689	endopeptidase La	-
A6K30_RS03585 (A6K30_03585)	rpsR	713683..713943 (-)	261	WP_002777087.1	30S ribosomal protein S18	-
A6K30_RS03590 (A6K30_03590)	-	713954..714502 (-)	549	WP_002777084.1	single-stranded DNA-binding protein	-
A6K30_RS03595 (A6K30_03595)	rpsF	714511..714888 (-)	378	WP_002777082.1	30S ribosomal protein S6	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 26797.20 Da
• Isoelectric Point: 9.3032

>NTDB_id=180370 A6K30_RS03565 WP_002780246.1 709297..710034(-) (proC) [Campylobacter coli strain YH501]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLKLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYELNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAAALLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFEAL
NASAT

Nucleotide

• Length: 738 bp

>NTDB_id=180370 A6K30_RS03565 WP_002780246.1 709297..710034(-) (proC) [Campylobacter coli strain YH501]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAGCTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTAGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAAACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAGTCATAG
AAATTTTAAATACTTTTGGCAAGGCTTATGAGTTAAACGAAGAAAAACAAATGAATGCTGCGATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCTAATGCTGGCGTGTATGAAGGATTATCAAAAGAGCTGAGTTT
AAATCTCACTCGTTCGCTTTTTAAAAGTGCTGCAGCCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATCT
GCTCGCCTGCAGGTGTTACCATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTTTTTGAGGCTCTT
AATGCTAGTGCAACATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (7-88)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (148-244)

3D structure

• AlphaFold DB: A0A5T1L8T6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	80.833	97.959	0.792