Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   A4W74_RS03920 Genome accession   NZ_CP015494
Coordinates   756861..758132 (+) Length   423 a.a.
NCBI ID   WP_253733864.1    Uniprot ID   -
Organism   Latilactobacillus curvatus strain TMW 1.1390     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 751861..763132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A4W74_RS03905 (A4W74_03885) - 751980..754727 (-) 2748 WP_253733862.1 YhgE/Pip domain-containing protein -
  A4W74_RS03910 (A4W74_03890) - 755041..755793 (+) 753 WP_253733863.1 isoprenyl transferase -
  A4W74_RS03915 (A4W74_03895) - 755808..756596 (+) 789 WP_004270081.1 phosphatidate cytidylyltransferase -
  A4W74_RS03920 (A4W74_03900) eeP 756861..758132 (+) 1272 WP_253733864.1 RIP metalloprotease RseP Regulator
  A4W74_RS03925 (A4W74_03905) - 758158..759879 (+) 1722 WP_089542221.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 423 a.a.        Molecular weight: 46011.71 Da        Isoelectric Point: 9.8330

>NTDB_id=180050 A4W74_RS03920 WP_253733864.1 756861..758132(+) (eeP) [Latilactobacillus curvatus strain TMW 1.1390]
MAAIIAFIIIFGILVVVHEFGHFYMAKRSGILVREFSIGMGPKLFATRKNGTTYTIRWLPLGGYVRMAGMADDESEIEAG
TQATLLLDEQETVQKINTSDKVTTLNGVPFQIAKTDLQKELWIEGYESGDESELKRYSVSHDATIVESDGTEVQIAPVDV
QFQSASLINRMLTNFAGPFNNFILAIVAFALFAFLNGGVPQNKAIVGTVMPNSPAQKAGLKMDDQLVKVAGKKVTTFTDF
SSVIAKYPNKPVNVQVKRAKQTRSLEITPKAVKVEGQKGKVGQIGVTAGLNHSVGAKLKYGFTQSWANATQIFKILGSFL
TGGFSLNKLAGPVGMYSMTTQFASQGFTMLVYFLAFLSVNLGIMNLIPIPALDGGKLVINVIEAIRGKPISPEKEGIVTL
VGVGMMVVLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=180050 A4W74_RS03920 WP_253733864.1 756861..758132(+) (eeP) [Latilactobacillus curvatus strain TMW 1.1390]
TTGGCGGCGATTATTGCGTTTATTATCATATTTGGCATTTTAGTAGTGGTGCATGAATTTGGCCACTTTTACATGGCGAA
ACGTTCTGGTATTTTGGTGCGTGAATTTTCAATTGGCATGGGGCCAAAATTATTTGCAACGCGCAAAAATGGCACGACTT
ATACGATTCGTTGGTTACCACTTGGCGGCTATGTCCGCATGGCGGGGATGGCGGATGATGAATCTGAAATCGAAGCCGGC
ACGCAAGCAACCTTGCTGTTAGACGAACAAGAAACTGTTCAAAAAATTAATACAAGTGACAAAGTAACCACGTTAAACGG
TGTCCCATTTCAAATTGCAAAAACTGACTTGCAAAAAGAATTATGGATTGAAGGCTATGAAAGTGGTGACGAATCCGAAT
TAAAGCGTTATTCGGTCAGTCACGATGCAACGATTGTTGAATCAGACGGAACGGAAGTGCAAATCGCACCCGTGGATGTT
CAATTCCAGTCGGCTAGTTTAATCAATCGGATGTTGACCAACTTCGCAGGACCGTTCAACAACTTTATCCTTGCGATTGT
GGCGTTTGCGCTCTTTGCTTTTTTAAACGGTGGCGTCCCACAAAACAAAGCGATTGTTGGCACAGTGATGCCAAACTCGC
CAGCACAAAAAGCCGGGCTTAAAATGGATGACCAGTTAGTGAAAGTTGCTGGCAAAAAAGTCACGACGTTTACTGATTTC
AGCTCGGTGATTGCAAAATATCCGAATAAACCAGTGAATGTCCAGGTTAAACGGGCAAAGCAAACTAGGTCACTCGAAAT
CACACCTAAAGCGGTGAAAGTCGAGGGGCAAAAGGGGAAAGTCGGCCAAATTGGTGTGACAGCTGGACTCAACCATAGCG
TGGGGGCTAAGTTGAAATATGGCTTCACCCAATCATGGGCGAATGCGACCCAGATTTTTAAAATTCTCGGGTCATTCTTA
ACGGGTGGTTTTTCACTCAATAAACTAGCCGGACCAGTCGGCATGTATTCAATGACGACGCAATTCGCGAGTCAAGGCTT
TACAATGCTCGTCTACTTCTTAGCGTTCTTATCCGTCAACTTGGGGATTATGAACCTGATTCCAATTCCGGCCCTCGATG
GTGGTAAGCTCGTGATCAACGTGATTGAAGCGATTCGCGGTAAACCCATCTCACCGGAAAAAGAAGGCATTGTCACCCTT
GTCGGGGTCGGCATGATGGTCGTCTTAATGGTCTTGGTCACATGGAACGATATTCAACGCTTTTTCTTTTAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(205-258)

Peptidase family M50 (Peptidase_M50)

(6-409)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

47.907

100

0.487
  eeP Streptococcus thermophilus LMD-9

47.907

100

0.487

Multiple sequence alignment