Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   A4W82_RS07035 Genome accession   NZ_CP015487
Coordinates   1359931..1361208 (-) Length   425 a.a.
NCBI ID   WP_061827030.1    Uniprot ID   -
Organism   Latilactobacillus sakei strain TMW 1.46     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1354931..1366208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A4W82_RS07030 (A4W82_06935) - 1358196..1359905 (-) 1710 WP_011374954.1 proline--tRNA ligase -
  A4W82_RS07035 (A4W82_06940) eeP 1359931..1361208 (-) 1278 WP_061827030.1 RIP metalloprotease RseP Regulator
  A4W82_RS07040 (A4W82_06945) - 1361414..1362202 (-) 789 WP_016265347.1 phosphatidate cytidylyltransferase -
  A4W82_RS07045 (A4W82_06950) - 1362233..1362988 (-) 756 WP_061827029.1 isoprenyl transferase -
  A4W82_RS07050 (A4W82_06955) - 1363156..1365903 (+) 2748 WP_142501048.1 YhgE/Pip domain-containing protein -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 46679.36 Da        Isoelectric Point: 9.6558

>NTDB_id=179991 A4W82_RS07035 WP_061827030.1 1359931..1361208(-) (eeP) [Latilactobacillus sakei strain TMW 1.46]
MAAIIAFIIIFGILVVVHEFGHFYMAKRSGILVREFSVGMGPKLFATRKNGTTYTIRWLPLGGYVRMAGMADDESEIEAG
TQATLILDEQGRVQQINTSDKVTTLNGVPFQIAKTDLQKELWVEGYEGGDESEMKRYPVLHDATIIEEDGTEVQIAPVDV
QFQSATLINRMLTNFAGPFNNFILAILAFILFAFLSGGVPQQSNQIGTVQKNSAAQKAGLKANDRLLKVDNKKVASFTDF
SAIISEHPNDTVAVRVQRGATEKTIKVTPKAVKVANQKEKVGQVGVTQKVKMDHSLKAKISYGFTQAWSIASQIFKILGS
FLTGGFSLDKLSGPVGMYSMTTQFTQQGFNALVYFLAFLSLNLGIMNLIPIPALDGGKLVLNIIEAIRRKPISPEKEGIV
TLIGVGIMVLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=179991 A4W82_RS07035 WP_061827030.1 1359931..1361208(-) (eeP) [Latilactobacillus sakei strain TMW 1.46]
TTGGCTGCAATTATTGCGTTTATCATCATCTTTGGTATTTTAGTAGTCGTTCATGAATTTGGGCATTTTTACATGGCTAA
GCGCTCAGGCATTTTGGTGCGAGAGTTTTCTGTCGGCATGGGACCTAAATTATTTGCAACTCGCAAAAACGGCACAACTT
ACACCATCCGGTGGTTACCATTAGGTGGTTACGTTCGAATGGCGGGAATGGCCGACGATGAATCTGAAATTGAAGCTGGC
ACACAAGCGACTTTAATTTTAGACGAACAAGGACGCGTTCAACAGATTAATACAAGTGACAAGGTCACCACGTTAAACGG
GGTACCTTTCCAAATTGCTAAAACAGATTTACAAAAAGAATTGTGGGTCGAAGGTTACGAAGGCGGCGACGAGTCAGAAA
TGAAACGTTATCCCGTCTTACATGATGCGACGATTATCGAAGAAGACGGAACGGAAGTGCAAATCGCACCCGTGGATGTC
CAATTCCAATCAGCAACGTTGATTAATCGGATGTTAACGAACTTTGCCGGACCATTTAATAACTTCATCCTCGCAATTCT
AGCCTTTATCCTCTTCGCTTTTCTAAGCGGGGGTGTGCCGCAGCAATCCAATCAAATTGGCACGGTACAAAAGAATTCTG
CTGCTCAAAAGGCAGGCTTAAAAGCCAACGATCGTCTTTTGAAAGTTGATAACAAAAAAGTAGCGAGCTTCACTGACTTT
AGTGCGATAATTTCAGAACACCCTAACGACACCGTTGCGGTACGCGTTCAACGGGGCGCAACTGAAAAGACAATCAAGGT
GACACCAAAAGCTGTCAAAGTGGCTAACCAAAAAGAAAAGGTTGGTCAAGTGGGAGTCACACAAAAAGTCAAAATGGATC
ATAGCCTAAAGGCCAAGATTTCTTACGGCTTTACACAAGCTTGGTCAATTGCCAGTCAGATTTTCAAGATCCTCGGGTCA
TTTTTAACCGGTGGGTTCTCACTAGATAAATTATCGGGGCCGGTCGGCATGTATTCAATGACGACCCAATTTACCCAACA
AGGCTTTAATGCGTTAGTTTATTTCTTAGCGTTCTTATCACTTAATTTGGGGATTATGAATCTAATTCCGATTCCGGCGT
TAGATGGTGGTAAGTTAGTCTTGAACATTATTGAAGCGATTCGTCGCAAACCTATTTCACCTGAAAAAGAAGGCATCGTG
ACATTAATCGGTGTCGGTATTATGGTGTTATTAATGGTCTTAGTCACGTGGAATGATATACAACGATTTTTCTTTTAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(206-258)

Peptidase family M50 (Peptidase_M50)

(6-411)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

48.611

100

0.494
  eeP Streptococcus thermophilus LMG 18311

48.611

100

0.494

Multiple sequence alignment