Detailed information NTG0179989

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BWQ98_RS10910
• Genome accession: NZ_CP019299
• Coordinates: 2021906..2023003 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266667.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain HKU1-14
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2016906..2028003

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BWQ98_RS10885 (BWQ98_10910)	pgsA	2017427..2017972 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
BWQ98_RS10890 (BWQ98_10915)	rodZ	2017983..2018804 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
BWQ98_RS10895 (BWQ98_10920)	-	2018846..2020129 (-)	1284	WP_000170215.1	pitrilysin family protein	-
BWQ98_RS10900 (BWQ98_10925)	-	2020126..2021376 (-)	1251	WP_000424271.1	pitrilysin family protein	-
BWQ98_RS10905 (BWQ98_10930)	yaaA	2021535..2021903 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
BWQ98_RS10910 (BWQ98_10935)	recF	2021906..2023003 (+)	1098	WP_000266667.1	DNA replication/repair protein RecF	Machinery gene
BWQ98_RS10915 (BWQ98_10940)	guaB	2023054..2024532 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
BWQ98_RS10920 (BWQ98_10945)	trpS	2024684..2025709 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
BWQ98_RS10925 (BWQ98_10950)	-	2025915..2027537 (+)	1623	WP_000958760.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41944.01 Da
• Isoelectric Point: 8.6746

>NTDB_id=179989 BWQ98_RS10910 WP_000266667.1 2021906..2023003(+) (recF) [Streptococcus pneumoniae strain HKU1-14]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSDQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=179989 BWQ98_RS10910 WP_000266667.1 2021906..2023003(+) (recF) [Streptococcus pneumoniae strain HKU1-14]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAAGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTACTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGATCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.452	100	0.995
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46