Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BWQ98_RS07685 Genome accession   NZ_CP019299
Coordinates   1444509..1445186 (-) Length   225 a.a.
NCBI ID   WP_000548961.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain HKU1-14     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1439509..1450186
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWQ98_RS07645 (BWQ98_07660) - 1439757..1440368 (-) 612 Protein_1453 NAD(P)-dependent oxidoreductase -
  BWQ98_RS07650 (BWQ98_07665) - 1440538..1440738 (+) 201 WP_001826938.1 hypothetical protein -
  BWQ98_RS07665 (BWQ98_07680) - 1441169..1441309 (+) 141 WP_000422775.1 MazG-like protein -
  BWQ98_RS07670 (BWQ98_07685) - 1441316..1441492 (+) 177 WP_000166031.1 MazG-like protein -
  BWQ98_RS07675 (BWQ98_07690) thrS 1441550..1443493 (+) 1944 WP_000608353.1 threonine--tRNA ligase -
  BWQ98_RS07680 (BWQ98_07695) - 1443542..1444516 (-) 975 WP_000887953.1 HAMP domain-containing histidine kinase -
  BWQ98_RS07685 (BWQ98_07700) braR 1444509..1445186 (-) 678 WP_000548961.1 response regulator transcription factor Regulator
  BWQ98_RS07690 (BWQ98_07705) - 1445342..1446415 (+) 1074 WP_001273814.1 DUF2974 domain-containing protein -
  BWQ98_RS07695 (BWQ98_07710) - 1446506..1446808 (-) 303 WP_000281608.1 hypothetical protein -
  BWQ98_RS07700 (BWQ98_07715) - 1446876..1447313 (-) 438 WP_001166786.1 Rrf2 family transcriptional regulator -
  BWQ98_RS07705 (BWQ98_07720) - 1447389..1448231 (-) 843 WP_000160928.1 metallophosphoesterase family protein -
  BWQ98_RS07710 (BWQ98_07725) - 1448343..1448993 (+) 651 WP_000188505.1 metal-dependent transcriptional regulator -
  BWQ98_RS07720 (BWQ98_07735) - 1449170..1449845 (+) 676 Protein_1465 nicotinamide mononucleotide transporter -

Sequence

Protein


Download         Length: 225 a.a.        Molecular weight: 25950.13 Da        Isoelectric Point: 5.1362

>NTDB_id=179943 BWQ98_RS07685 WP_000548961.1 1444509..1445186(-) (braR) [Streptococcus pneumoniae strain HKU1-14]
MHKILLIEDDQVIRQQVGKMLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYAGVILNTKSMDLHYQGQVLNLTKNEFQIL
RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA

Nucleotide


Download         Length: 678 bp        

>NTDB_id=179943 BWQ98_RS07685 WP_000548961.1 1444509..1445186(-) (braR) [Streptococcus pneumoniae strain HKU1-14]
ATGCACAAGATTTTATTAATAGAAGATGATCAGGTCATTCGTCAACAGGTCGGGAAAATGCTCTCTGAATGGGGATTTGA
AGTGGTCCTGGTAGAAGACTTTATGGAAGTTTTGAGTCTATTTGTTCAGTCGGAACCTCATCTGGTCCTCATGGATATTG
GTTTGCCCTTGTTTAATGGTTATCACTGGTGTCAGGAAATCCGCAAGATTTCCAAGGTACCTATCATGTTTCTTTCTTCG
AGAGACCAGGCTATGGATATTGTTATGGCAATCAATATGGGGGCGGATGACTTTGTGACCAAGCCTTTTGACCAGCAGGT
TCTTTTAGCTAAGGTTCAGGGCTTGTTGCGTCGTTCCTATGAGTTTGGGCGTGATGAGAGTTTGCTGGAATATGCTGGTG
TTATCCTCAATACCAAATCCATGGATTTACATTATCAAGGGCAAGTCTTGAATTTGACCAAGAATGAATTCCAGATTTTA
CGCGTGTTATTTGAGCATGCAGGCAACATCGTAGCACGTGACGACCTGATGCGGGAACTTTGGAACAGTGACTTTTTCAT
TGATGATAATACCCTCTCTGTCAATGTGGCTCGTTTGCGTAAAAAGTTGGAGGAGCAGGGATTGGTAGGATTTATCGAGA
CCAAGAAAGGAATAGGGTACGGATTGAAGCATGCTTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.624

96.889

0.471
  vicR Streptococcus mutans UA159

34.894

100

0.364

Multiple sequence alignment