Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   A1D33_RS07485 Genome accession   NZ_CP015443
Coordinates   1654953..1655351 (+) Length   132 a.a.
NCBI ID   WP_039252825.1    Uniprot ID   -
Organism   Bacillus velezensis strain CC09     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1649953..1660351
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A1D33_RS07465 (A1D33_007470) - 1652354..1652716 (-) 363 WP_014304320.1 winged helix-turn-helix transcriptional regulator -
  A1D33_RS07470 (A1D33_007475) hxlA 1652948..1653583 (+) 636 WP_015416785.1 3-hexulose-6-phosphate synthase -
  A1D33_RS07475 (A1D33_007480) hxlB 1653580..1654137 (+) 558 WP_039252823.1 6-phospho-3-hexuloisomerase -
  A1D33_RS07480 (A1D33_007485) nucA/comI 1654495..1654932 (+) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  A1D33_RS07485 (A1D33_007490) nin/comJ 1654953..1655351 (+) 399 WP_039252825.1 competence protein ComJ Regulator
  A1D33_RS07490 (A1D33_007495) - 1655392..1656828 (-) 1437 WP_015416781.1 glycoside hydrolase family 1 protein -
  A1D33_RS07495 (A1D33_007500) - 1656932..1657210 (-) 279 WP_263612330.1 YckD family protein -
  A1D33_RS07500 (A1D33_007505) - 1657327..1657761 (-) 435 WP_012116767.1 RDD family protein -
  A1D33_RS07505 (A1D33_007510) - 1657776..1658912 (-) 1137 WP_025284207.1 zinc-dependent alcohol dehydrogenase -
  A1D33_RS07510 (A1D33_007515) - 1658977..1660179 (-) 1203 WP_039252831.1 GTP-binding protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14993.97 Da        Isoelectric Point: 4.9712

>NTDB_id=179841 A1D33_RS07485 WP_039252825.1 1654953..1655351(+) (nin/comJ) [Bacillus velezensis strain CC09]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAASM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=179841 A1D33_RS07485 WP_039252825.1 1654953..1655351(+) (nin/comJ) [Bacillus velezensis strain CC09]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTCATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCTCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.758

100

0.758

Multiple sequence alignment