Detailed information NTG0179839

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: A1D33_RS07285
• Genome accession: NZ_CP015443
• Coordinates: 1593018..1594166 (-)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CC09
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1588018..1599166

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A1D33_RS07260 (A1D33_007265)	-	1588156..1588914 (-)	759	WP_003156330.1	ABC transporter ATP-binding protein	-
A1D33_RS07265 (A1D33_007270)	-	1588908..1589855 (-)	948	WP_040238557.1	iron chelate uptake ABC transporter family permease subunit	-
A1D33_RS07270 (A1D33_007275)	ceuB	1589845..1590798 (-)	954	WP_015239156.1	ABC transporter permease	Machinery gene
A1D33_RS07275 (A1D33_007280)	-	1591212..1592576 (+)	1365	WP_042634827.1	aspartate kinase	-
A1D33_RS20420	-	1592656..1592766 (+)	111	WP_369719092.1	YjcZ family sporulation protein	-
A1D33_RS07280 (A1D33_007285)	phrC	1592915..1593034 (-)	120	WP_031378677.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
A1D33_RS07285 (A1D33_007290)	rapC	1593018..1594166 (-)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
A1D33_RS07290 (A1D33_007295)	-	1594308..1595741 (-)	1434	WP_162303988.1	sensor histidine kinase	-
A1D33_RS07295 (A1D33_007300)	-	1595728..1596411 (-)	684	WP_007410267.1	response regulator transcription factor	-
A1D33_RS07300 (A1D33_007305)	-	1596624..1598060 (+)	1437	WP_015416809.1	ABC transporter permease	-
A1D33_RS07305 (A1D33_007310)	-	1598075..1598758 (+)	684	WP_015416808.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=179839 A1D33_RS07285 WP_007410270.1 1593018..1594166(-) (rapC) [Bacillus velezensis strain CC09]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=179839 A1D33_RS07285 WP_007410270.1 1593018..1594166(-) (rapC) [Bacillus velezensis strain CC09]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568