Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   A6F53_RS08315 Genome accession   NZ_CP015398
Coordinates   1712434..1713711 (-) Length   425 a.a.
NCBI ID   WP_024525166.1    Uniprot ID   A0A0C1PVE3
Organism   Levilactobacillus brevis strain NPS-QW-145     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1707434..1718711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6F53_RS08310 (A6F53_08300) - 1710689..1712398 (-) 1710 WP_065201465.1 proline--tRNA ligase -
  A6F53_RS08315 (A6F53_08305) eeP 1712434..1713711 (-) 1278 WP_024525166.1 RIP metalloprotease RseP Regulator
  A6F53_RS08320 (A6F53_08310) - 1713807..1714598 (-) 792 WP_065201466.1 phosphatidate cytidylyltransferase -
  A6F53_RS08325 (A6F53_08315) - 1714620..1715408 (-) 789 WP_039104486.1 isoprenyl transferase -
  A6F53_RS08330 (A6F53_08320) - 1715511..1715933 (-) 423 WP_011668021.1 hypothetical protein -
  A6F53_RS08335 (A6F53_08325) frr 1715960..1716517 (-) 558 WP_021741162.1 ribosome recycling factor -
  A6F53_RS08340 (A6F53_08330) pyrH 1716520..1717242 (-) 723 WP_011668022.1 UMP kinase -
  A6F53_RS08345 (A6F53_08335) tsf 1717389..1718273 (-) 885 WP_011668023.1 translation elongation factor Ts -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 46042.32 Da        Isoelectric Point: 7.6007

>NTDB_id=179164 A6F53_RS08315 WP_024525166.1 1712434..1713711(-) (eeP) [Levilactobacillus brevis strain NPS-QW-145]
MITTIITFIIVFGILVIVHEFGHFYFAKRGGILVREFSIGMGPKLVYHRGKDGTTYTLRLLPVGGYVRMAGAEDDEEELK
PGTPVSLYVGTDEKVERINTSKKSTLFNGIPLEVTATDLENELWIEGYENGDESAIKRYAVAHDATVIESDGTELQIAPK
DVQFQSASLGRRLMTNFAGPMNNILLAIVTFMLMSFAQGGVSMGTNQVQVADSPVSVAKQAGVKTNDKITAVNGRKTTSW
TDLSTAIQPLANKKTTLTIQRGSTTKHITVTPKGETSNGKTVGMIGITQAQDKSIGAILASGFTQTWTMTKALFGALWHM
VSGHFSLNDLGGPVAIFATTSQATKFGLVGVLNFLAFLSINLAIVNLLPIPALDGGKILLNFIEAIRRKPLSENVEAAIT
LIGVGFLVLLMLLVTWNDIERYFIH

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=179164 A6F53_RS08315 WP_024525166.1 1712434..1713711(-) (eeP) [Levilactobacillus brevis strain NPS-QW-145]
GTGATTACAACGATTATTACCTTTATCATTGTCTTTGGGATTTTGGTCATTGTCCATGAATTCGGGCATTTTTACTTTGC
CAAGCGAGGCGGCATTCTCGTCCGTGAATTCTCGATTGGGATGGGGCCAAAATTGGTTTACCATCGTGGCAAAGATGGCA
CGACCTACACACTACGGTTATTGCCAGTGGGCGGTTACGTCCGAATGGCGGGTGCCGAAGATGACGAAGAAGAGCTGAAA
CCGGGAACGCCAGTTAGTTTGTACGTGGGCACTGACGAAAAGGTTGAACGAATCAATACCAGCAAAAAATCCACGTTATT
TAACGGTATTCCGTTAGAAGTTACCGCAACAGATCTAGAGAATGAATTGTGGATTGAGGGCTATGAAAATGGTGACGAGA
GTGCCATTAAGCGTTATGCGGTTGCTCACGATGCCACGGTGATTGAAAGCGATGGTACGGAACTGCAAATTGCCCCTAAG
GACGTTCAATTTCAGTCGGCATCGTTAGGCCGGCGATTGATGACGAATTTCGCTGGGCCGATGAACAATATCTTATTAGC
GATTGTCACCTTTATGTTGATGTCCTTTGCCCAGGGGGGCGTTTCAATGGGCACGAATCAGGTTCAAGTAGCTGATTCAC
CGGTATCAGTGGCGAAACAAGCCGGCGTGAAGACCAACGATAAGATTACGGCAGTCAATGGTCGAAAGACCACCAGCTGG
ACCGATCTTAGTACAGCGATTCAGCCATTGGCTAACAAGAAAACAACGCTGACGATTCAAAGGGGATCGACAACCAAACA
CATTACGGTGACACCTAAAGGTGAAACTTCCAACGGTAAGACGGTGGGAATGATTGGGATCACGCAAGCCCAAGATAAGA
GCATTGGGGCCATCTTAGCTTCTGGATTTACACAGACGTGGACGATGACCAAAGCGTTGTTTGGGGCTTTGTGGCACATG
GTTTCTGGTCACTTTAGCTTGAATGATTTAGGCGGACCAGTCGCCATTTTTGCCACAACCTCACAGGCAACCAAGTTTGG
CTTGGTTGGCGTGTTAAATTTCTTAGCCTTTTTATCAATTAATTTGGCAATTGTGAACTTACTGCCAATTCCAGCCTTGG
ATGGTGGTAAAATATTATTAAACTTTATTGAAGCTATTCGGCGTAAGCCGCTTTCAGAAAACGTGGAAGCCGCAATTACG
TTGATTGGTGTGGGGTTCTTAGTTCTGCTCATGCTACTGGTGACGTGGAATGATATTGAACGCTACTTTATTCATTAA

Domains


Predicted by InterproScan.

(214-261)

(7-410)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0C1PVE3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.941

100

0.489

  eeP Streptococcus thermophilus LMD-9

48.941

100

0.489


Multiple sequence alignment