Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   AS891_RS03970 Genome accession   NZ_CP015375
Coordinates   764859..764978 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis subsp. subtilis strain KCTC 3135     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 759859..769978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AS891_RS03950 (AS891_03945) pbpG 760215..762290 (-) 2076 WP_003227540.1 transglycosylase domain-containing protein -
  AS891_RS03955 (AS891_03950) speE 762492..763322 (+) 831 WP_003227543.1 spermidine synthase -
  AS891_RS03960 (AS891_03955) speB 763383..764255 (+) 873 WP_003227545.1 agmatinase -
  AS891_RS03965 (AS891_03960) ywhH 764287..764760 (-) 474 WP_003227547.1 YbaK/EbsC family protein -
  AS891_RS03970 (AS891_03965) phrF 764859..764978 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  AS891_RS03975 (AS891_03970) rapF 764962..766107 (-) 1146 WP_003227549.1 response regulator aspartate phosphatase RapF Regulator
  AS891_RS23250 (AS891_03975) - 766110..766340 (+) 231 WP_009968328.1 hypothetical protein -
  AS891_RS03985 (AS891_03980) ywhK 766337..767692 (+) 1356 WP_003227552.1 YncE family protein -
  AS891_RS03990 (AS891_03985) ywhL 767731..769107 (+) 1377 WP_003244415.1 YncE family protein -
  AS891_RS03995 (AS891_03990) albG 769113..769814 (-) 702 WP_003243391.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=178884 AS891_RS03970 WP_009968329.1 764859..764978(-) (phrF) [Bacillus subtilis subsp. subtilis strain KCTC 3135]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=178884 AS891_RS03970 WP_009968329.1 764859..764978(-) (phrF) [Bacillus subtilis subsp. subtilis strain KCTC 3135]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment