Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   BT246_RS06895 Genome accession   NZ_CP015350
Coordinates   1324546..1325229 (+) Length   227 a.a.
NCBI ID   WP_000350715.1    Uniprot ID   A0AAN4HLX4
Organism   Bacillus thuringiensis strain MYBT18246     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1319546..1330229
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BT246_RS06875 (BT246_14190) - 1320610..1322256 (+) 1647 WP_065482702.1 peptide ABC transporter substrate-binding protein -
  BT246_RS06880 (BT246_14200) - 1322284..1322487 (-) 204 WP_000559974.1 hypothetical protein -
  BT246_RS06885 (BT246_14210) spx 1323081..1323476 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  BT246_RS06890 (BT246_14220) - 1323526..1324200 (-) 675 WP_000362612.1 TerC family protein -
  BT246_RS06895 (BT246_14230) mecA 1324546..1325229 (+) 684 WP_000350715.1 adaptor protein MecA Regulator
  BT246_RS06900 (BT246_14240) - 1325302..1326846 (+) 1545 WP_065482705.1 cardiolipin synthase -
  BT246_RS06905 (BT246_14250) - 1326927..1328171 (+) 1245 WP_000612280.1 competence protein CoiA -
  BT246_RS06910 (BT246_14260) pepF 1328222..1330048 (+) 1827 WP_000003352.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26996.03 Da        Isoelectric Point: 3.9822

>NTDB_id=178764 BT246_RS06895 WP_000350715.1 1324546..1325229(+) (mecA) [Bacillus thuringiensis strain MYBT18246]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=178764 BT246_RS06895 WP_000350715.1 1324546..1325229(+) (mecA) [Bacillus thuringiensis strain MYBT18246]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATCCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGATGGGCAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATTGAATC
ATTATTCCAACAAGAGTTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTGTTTTAGAATATGGGGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559


Multiple sequence alignment