Detailed information NTG0178760

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: BT246_RS06790
• Genome accession: NZ_CP015350
• Coordinates: 1301717..1304317 (+)
• Length: 866 a.a.
• NCBI ID: WP_065482693.1
• Uniprot ID: A0A9W3S9J5
• Organism: Bacillus thuringiensis strain MYBT18246
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1296717..1309317

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BT246_RS06755 (BT246_13940)	prsA	1297567..1298337 (-)	771	WP_065482687.1	peptidylprolyl isomerase PrsA	-
BT246_RS06760 (BT246_13950)	-	1298466..1298597 (-)	132	WP_001120851.1	DUF3941 domain-containing protein	-
BT246_RS06765 (BT246_13960)	-	1298698..1299555 (+)	858	WP_016082482.1	YitT family protein	-
BT246_RS06770 (BT246_13970)	-	1299581..1299778 (-)	198	WP_065482690.1	DUF3813 domain-containing protein	-
BT246_RS06775 (BT246_13980)	-	1299779..1299919 (-)	141	WP_000516816.1	hypothetical protein	-
BT246_RS06780 (BT246_13990)	-	1300025..1300834 (-)	810	WP_001041231.1	Cof-type HAD-IIB family hydrolase	-
BT246_RS06785 (BT246_14000)	-	1301327..1301506 (+)	180	WP_000531422.1	YjzC family protein	-
BT246_RS06790 (BT246_14010)	clpC	1301717..1304317 (+)	2601	WP_065482693.1	ATP-dependent chaperone ClpB	Regulator
BT246_RS06795 (BT246_14020)	-	1304356..1304538 (-)	183	WP_001211116.1	YjzD family protein	-
BT246_RS06800 (BT246_14030)	-	1304695..1305429 (+)	735	WP_000028688.1	hydrolase	-
BT246_RS06805 (BT246_14040)	-	1305459..1306331 (+)	873	WP_065482696.1	NAD-dependent epimerase/dehydratase family protein	-
BT246_RS06810 (BT246_14050)	comZ	1306386..1306562 (+)	177	WP_001986215.1	ComZ family protein	Regulator
BT246_RS06815 (BT246_14060)	fabH	1306794..1307726 (+)	933	WP_001100533.1	beta-ketoacyl-ACP synthase III	-
BT246_RS06820 (BT246_14070)	fabF	1307758..1308996 (+)	1239	WP_000412656.1	beta-ketoacyl-ACP synthase II	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97453.51 Da
• Isoelectric Point: 5.2398

>NTDB_id=178760 BT246_RS06790 WP_065482693.1 1301717..1304317(+) (clpC) [Bacillus thuringiensis strain MYBT18246]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEALKQSAESLIKKKPSVTGSGAK
VGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLLAFSEEKSDINQLFARLHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLEGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLAERHIT
VELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=178760 BT246_RS06790 WP_065482693.1 1301717..1304317(+) (clpC) [Bacillus thuringiensis strain MYBT18246]
ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCACCA
AGAGGTGGATACTGTTCATCTATTACTTGCATTATTAGAAGAGCAAGATGGATTAGCAGTACGTATATTTCAAAAAATGA
ATGTTGATATAGAAGCATTAAAGCAAAGCGCTGAAAGCTTAATTAAAAAGAAACCTTCTGTAACAGGGAGCGGTGCAAAG
GTTGGAAAATTGTATGTAACGAGCGCTCTGCAACAATTGCTTGTAAGAGCAGGGAAAGAAGCAGAAAAACTGCAGGATGA
TTACATTTCAGTCGAACATGTATTGCTTGCTTTTTCCGAAGAAAAAAGCGATATAAATCAATTATTTGCAAGATTGCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGCCGTGATTTAGTGGCAGAAGTGAGAGCTGGGAAAATTGATCCTGTTATCGGCCGAGA
TAGTGAAATTCGACGCGTTATCCGCATTCTTTCACGTAAAACGAAAAACAATCCTGTTTTAATTGGTGAGCCAGGTGTTG
GTAAAACAGCAATCGTTGAAGGATTAGCACAGCGTATTGTGAAAAAGGATGTACCTGAAGGATTGAAAGATAGAACGATT
TTTGCGTTAGATATGAGTGCGCTCGTAGCAGGTGCGAAATTCCGTGGTGAGTTCGAAGAGCGTCTGCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGACGCATTTTATTATTCATTGATGAACTTCATACAATCGTTGGAGCTGGTAAAACAGAAG
GTGCGATGGATGCAGGAAATATGTTAAAACCGATGCTTGCTCGTGGTGAACTGCATTGTATCGGGGCGACAACATTAGAT
GAATATCGTAAATATATTGAAAAAGATCCAGCACTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA
AGATACGATTTCCATATTACGTGGATTAAAAGAACGCTTTGAAATTTATCACGGTGTAAATATTCATGACCGTGCGATTG
TAGCAGCGTCAGTTTTATCAGATCGATATATTTCAGATCGCTTCTTACCGGATAAAGCGATTGACCTTGTTGATGAAGCG
TGCGCAACAATTCGTACAGAAATTGATTCTATGCCTACAGAATTAGATGAAGTAACGCGTCGTATTATGCAGCTGGAAAT
TGAAGAAGCGGCTCTTGGAAAAGAAACGGATCGTGGTAGCCAAGAGCGTCTAAAAACATTGCAACGTGAATTATCGGATT
TAAAAGAAGTTGCAAGTGGTATGAGAGCGAAATGGGAGAAAGAAAAAGAAGACATTCACAAAGTTCGTGACTTACGTGAA
CATTTAGAACGTCTGCGCCGTGAATTAGAAGAAGCAGAAGGTAATTACGATTTAAATAAAGCAGCCGAACTTCGTCACGG
GAAAATTCCTGCAATCGAAAAAGAATTAAAAGAAGCGGAAGAAATGGGCGCGCATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAAATTGCAGATATTGTTTCACGCTGGACTGGTATTCCTGTTGCTAAACTTGTTGAAGGC
GAACGTGAGAAATTACTACGCTTAGAGCAAATCTTATCAGAGCGTGTCATCGGACAAGAGGAAGCAGTAAGCCTAGTATC
AGACGCGGTTCTTCGTGCACGCGCTGGTATTAAAGACCCGAATCGTCCAATTGGTTCCTTCATTTTCTTAGGCCCTACGG
GTGTTGGTAAAACAGAACTTGCAAAAACGTTAGCGCAGTCTTTATTCGATAGTGAAGAGCAAATGATTCGTATTGACATG
TCTGAGTATATGGAGAAACACGCTGTGTCACGCTTAATTGGTGCGCCTCCTGGATATGTAGGGTATGAAGAGGGCGGTCA
ATTAACAGAAGCGGTAAGACGTAAACCGTATTCAGTTATTTTGTTAGACGAAATCGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGATGATGGACGTATTACAGATTCACAAGGAAGAACAGTAGACTTTAAAAACACAGTTATT
ATTATGACTTCAAATATTGGATCTGCTCATTTACTAGAGGGATTAGAAGAAGATGGTTCGATTAAAGAGGAATCAAGAGA
CCTTGTAATGGGGCAATTAAGAGGACATTTCCGCCCTGAATTTTTAAACCGTGTTGATGAAATTATTTTATTCAAACCTC
TTACAACGAATGAAATTAAAGGCATTGTTGATAAAATTGTAAAAGAACTACAAGGCCGTCTAGCTGAACGTCACATTACA
GTAGAATTAACAGATGCAGCAAAAGAATTTGTTGTAGAAGCTGGTTTCGACCCAATGTACGGAGCTCGTCCATTAAAACG
ATACGTACAACGTCAAGTGGAAACGAAATTAGCAAGAGAATTAATTGCAGGAACAATTACAGACAATAGTCACGTAGTTG
TTGATGTAGAAAATAACGAATTAGTCGTTCATGTGAAATGA

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

• AAA lid domain (AAA_lid_9) (345-447)

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.886	100	0.484
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	41.648	100	0.42
clpC	Lactococcus lactis subsp. cremoris KW2	47.339	82.448	0.39