Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | A5479_RS04735 | Genome accession | NZ_CP015344 |
| Coordinates | 1040680..1041276 (+) | Length | 198 a.a. |
| NCBI ID | WP_027224065.1 | Uniprot ID | A0AAP3HB18 |
| Organism | Legionella pneumophila strain D-7630 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1035680..1046276
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A5479_RS04720 (A5479_04720) | - | 1037626..1038633 (-) | 1008 | WP_014843598.1 | hypothetical protein | - |
| A5479_RS04725 (A5479_04725) | pilM | 1039050..1040114 (+) | 1065 | WP_014843599.1 | type IV pilus assembly protein PilM | Machinery gene |
| A5479_RS04730 (A5479_04730) | pilN | 1040118..1040666 (+) | 549 | WP_011213354.1 | PilN domain-containing protein | Machinery gene |
| A5479_RS04735 (A5479_04735) | pilO | 1040680..1041276 (+) | 597 | WP_027224065.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| A5479_RS04740 (A5479_04740) | pilP | 1041273..1041857 (+) | 585 | WP_014843601.1 | pilus assembly protein PilP | Machinery gene |
| A5479_RS04745 (A5479_04745) | pilQ | 1041861..1043957 (+) | 2097 | WP_014843602.1 | type IV pilus secretin PilQ | Machinery gene |
| A5479_RS04750 (A5479_04750) | aroK | 1044402..1044929 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
| A5479_RS04755 (A5479_04755) | aroB | 1044916..1046025 (+) | 1110 | WP_013101269.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 22436.16 Da Isoelectric Point: 5.3369
>NTDB_id=178589 A5479_RS04735 WP_027224065.1 1040680..1041276(+) (pilO) [Legionella pneumophila strain D-7630]
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSGDGKTVSQDELVMAITAKIYRYRAQ
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSGDGKTVSQDELVMAITAKIYRYRAQ
Nucleotide
Download Length: 597 bp
>NTDB_id=178589 A5479_RS04735 WP_027224065.1 1040680..1041276(+) (pilO) [Legionella pneumophila strain D-7630]
ATGGACACGGTCAATTTAAATGAATTAACTCTAGAGAATGTTGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTAATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGCTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTTCCGGCGAAAAATGAAATGCCTGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAGGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGATGGC
TATCACTGCGAAAATATACAGATATCGGGCACAATGA
ATGGACACGGTCAATTTAAATGAATTAACTCTAGAGAATGTTGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTAATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGCTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTTCCGGCGAAAAATGAAATGCCTGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAGGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGATGGC
TATCACTGCGAAAATATACAGATATCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
99.497 |
100 |
1 |
| comO | Acinetobacter baylyi ADP1 |
40.526 |
95.96 |
0.389 |