Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   V471_RS04920 Genome accession   NZ_CP015283
Coordinates   942810..943253 (+) Length   147 a.a.
NCBI ID   WP_002885568.1    Uniprot ID   A0A0A1DW04
Organism   Streptococcus salivarius strain ATCC 25975     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 937810..948253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V471_RS04905 (V471_04840) gdhA 938882..940234 (+) 1353 WP_002885547.1 NADP-specific glutamate dehydrogenase -
  V471_RS04910 (V471_04845) - 940515..942056 (+) 1542 WP_232326839.1 YfhO family protein -
  V471_RS04915 (V471_04850) - 942214..942624 (+) 411 WP_014633541.1 peptide deformylase -
  V471_RS04920 (V471_04855) rcrR 942810..943253 (+) 444 WP_002885568.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  V471_RS04925 (V471_04860) rcrP 943257..945071 (+) 1815 WP_084871161.1 ABC transporter ATP-binding protein Regulator
  V471_RS04930 (V471_04865) rcrQ 945061..946839 (+) 1779 WP_049529161.1 ABC transporter ATP-binding protein Regulator
  V471_RS04935 (V471_04870) - 946947..947570 (+) 624 WP_002886697.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17181.67 Da        Isoelectric Point: 9.3639

>NTDB_id=178300 V471_RS04920 WP_002885568.1 942810..943253(+) (rcrR) [Streptococcus salivarius strain ATCC 25975]
MHGKDTFSEFREFINTMESRVQELGKVHGVEHLAGPQGFAVKYLSDNQDKEIFIKDIEKRLCISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKARDVKHFREAIHEQLLEGISKEDAETAFRVFHQIRMNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=178300 V471_RS04920 WP_002885568.1 942810..943253(+) (rcrR) [Streptococcus salivarius strain ATCC 25975]
ATGCATGGAAAAGATACTTTTAGTGAATTCAGAGAATTCATCAATACTATGGAATCTCGCGTGCAAGAGTTAGGAAAGGT
CCATGGGGTTGAGCATTTAGCTGGCCCACAAGGATTTGCCGTCAAGTATTTGTCTGACAATCAAGATAAAGAAATCTTTA
TCAAAGACATTGAAAAAAGACTATGTATTTCTAAATCAGTGGCTAGTAATTTGGTCAAACGAATGGAAAAAAATGGTTTT
GTTGAGTTGGTGACATCGGACAAGGATAAACGCTACAAGTATGTTCATCTGACAGACTTAGGTAAAAAGAAAGCTCGAGA
TGTCAAACATTTTCGAGAGGCCATCCATGAACAGCTGTTAGAAGGTATTTCCAAAGAAGATGCTGAAACAGCCTTTCGTG
TCTTTCACCAAATTCGTATGAATTTAGAAAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(37-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A1DW04

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

58.156

95.918

0.558

Multiple sequence alignment