Detailed information NTG0178287

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: V471_RS03770
• Genome accession: NZ_CP015283
• Coordinates: 715786..716826 (+)
• Length: 346 a.a.
• NCBI ID: WP_014633662.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain ATCC 25975
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 710786..721826

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V471_RS03755 (V471_03720)	-	712039..713685 (+)	1647	WP_014633665.1	peptide ABC transporter substrate-binding protein	-
V471_RS03760 (V471_03725)	-	713816..714730 (+)	915	WP_045001977.1	ABC transporter permease	-
V471_RS03765 (V471_03730)	-	714741..715772 (+)	1032	WP_014633663.1	ABC transporter permease	-
V471_RS03770 (V471_03735)	oppD	715786..716826 (+)	1041	WP_014633662.1	ABC transporter ATP-binding protein	Regulator
V471_RS03775 (V471_03740)	amiF	716828..717766 (+)	939	WP_014633661.1	ABC transporter ATP-binding protein	Regulator
V471_RS03780 (V471_03745)	-	717819..719068 (-)	1250	Protein_682	ISL3 family transposase	-
V471_RS03785 (V471_03750)	-	719308..719667 (+)	360	WP_045001973.1	hypothetical protein	-
V471_RS03790 (V471_03755)	hslO	719747..720613 (+)	867	WP_002883609.1	Hsp33 family molecular chaperone HslO	-
V471_RS03795 (V471_03760)	dusB	720606..721583 (+)	978	WP_002886445.1	tRNA dihydrouridine synthase DusB	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 38554.29 Da
• Isoelectric Point: 5.2741

>NTDB_id=178287 V471_RS03770 WP_014633662.1 715786..716826(+) (oppD) [Streptococcus salivarius strain ATCC 25975]
MTKETILSVKNLHVNFHTYAGEVKAIRDVNFDLKKGETLAIVGESGSGKSVTTRTLMGLSDKNAEVIGEITFKGRNMQTL
KEQDWVEVRGNDIAMIFQDPMTSLDPTMKIGHQIAEPIMLHAKVSQKEALEMALQLMKDVGIPNAEEHINDYPHQWSGGM
RQRAVIAIALAADPEILIADEPTTALDVTIQAQILHLMKKIQEERNSSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPKHPYTWGLLNSMPTTETESGSLEAIPGTPPDLLYPPKGDAFAARNAFALDIDYQEEPPMFKVSDTHFAATWLL
DERAPKVTPPSPILKRWEKWSKMKEK

Nucleotide

• Length: 1041 bp

>NTDB_id=178287 V471_RS03770 WP_014633662.1 715786..716826(+) (oppD) [Streptococcus salivarius strain ATCC 25975]
ATGACGAAAGAAACGATTTTAAGTGTAAAAAATCTCCATGTTAATTTTCATACTTACGCTGGAGAAGTAAAAGCGATTCG
TGATGTTAATTTTGACTTAAAAAAAGGTGAAACATTAGCGATTGTTGGTGAGTCTGGTTCAGGAAAATCTGTAACGACAA
GGACACTAATGGGGCTATCAGATAAAAATGCTGAGGTAATTGGAGAAATTACCTTTAAGGGACGCAATATGCAAACCTTG
AAGGAGCAAGATTGGGTTGAAGTTCGTGGAAATGATATTGCTATGATTTTTCAGGATCCTATGACCAGCCTTGACCCTAC
TATGAAAATTGGACACCAAATTGCTGAGCCTATCATGCTTCATGCCAAGGTATCTCAGAAGGAAGCCTTAGAAATGGCTT
TACAATTAATGAAAGATGTTGGTATACCTAATGCTGAAGAACATATAAATGATTATCCTCATCAATGGTCAGGAGGAATG
CGTCAAAGAGCAGTAATTGCCATTGCTCTAGCGGCAGATCCTGAAATTTTGATTGCTGATGAGCCTACGACAGCCTTAGA
TGTAACGATTCAAGCACAAATTCTTCATCTTATGAAAAAAATTCAAGAAGAGCGTAATTCATCTATTATTTTTATTACTC
ATGACTTGGGCGTTGTCGCTGGTATGGCTGATCGTGTAGCGGTAATGTATGCCGGTAAAATTGTGGAATATGGTACTGTG
GATGAGGTTTTCTACAATCCGAAACACCCATACACGTGGGGGCTTCTTAACTCAATGCCTACAACAGAAACAGAATCTGG
TAGTCTAGAAGCTATTCCAGGAACTCCCCCAGACTTACTTTATCCTCCTAAAGGAGATGCCTTTGCTGCTCGAAATGCCT
TTGCTTTAGATATTGATTATCAGGAAGAACCGCCAATGTTTAAAGTATCAGATACGCATTTTGCAGCAACATGGCTCTTA
GATGAACGAGCTCCTAAAGTAACCCCTCCTTCACCAATATTGAAACGATGGGAAAAATGGTCAAAGATGAAGGAGAAATA
A

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	81.105	99.422	0.806
amiE	Streptococcus salivarius strain HSISS4	57.227	97.977	0.561
amiE	Streptococcus thermophilus LMG 18311	56.637	97.977	0.555
amiE	Streptococcus thermophilus LMD-9	56.637	97.977	0.555