Detailed information NTG0178232

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BE937_RS23995
• Genome accession: NZ_CP019020
• Coordinates: 4139965..4140990 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain Ecol_244
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4134965..4145990

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BE937_RS23975 (BE937_24390)	metJ	4136150..4136467 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
BE937_RS23980 (BE937_24395)	yiiX	4136527..4137135 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
BE937_RS23985 (BE937_24400)	rpmE	4137196..4137408 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
BE937_RS23990 (BE937_24405)	priA	4137611..4139809 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
BE937_RS23995 (BE937_24410)	cytR	4139965..4140990 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
BE937_RS24000 (BE937_24415)	ftsN	4141082..4142041 (+)	960	WP_000068834.1	cell division protein FtsN	-
BE937_RS24005 (BE937_24420)	hslV	4142134..4142664 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
BE937_RS24010 (BE937_24425)	hslU	4142674..4144005 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
BE937_RS24015 (BE937_24430)	menA	4144072..4144998 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BE937_RS24020 (BE937_24435)	rraA	4145091..4145576 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
BE937_RS24025 (BE937_24440)	zapB	4145661..4145906 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=178232 BE937_RS23995 WP_000644908.1 4139965..4140990(+) (cytR) [Escherichia coli strain Ecol_244]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=178232 BE937_RS23995 WP_000644908.1 4139965..4140990(+) (cytR) [Escherichia coli strain Ecol_244]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625