Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   NX99_RS06870 Genome accession   NZ_CP015282
Coordinates   1516814..1517581 (-) Length   255 a.a.
NCBI ID   WP_084915170.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 27945     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1511814..1522581
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX99_RS06850 (NX99_06720) ychF 1512351..1513466 (-) 1116 WP_002883967.1 redox-regulated ATPase YchF -
  NX99_RS06855 (NX99_06725) - 1513676..1513867 (-) 192 WP_037599384.1 DUF951 domain-containing protein -
  NX99_RS06860 (NX99_06730) dnaN 1513919..1515055 (-) 1137 WP_084915168.1 DNA polymerase III subunit beta -
  NX99_RS06865 (NX99_06735) dnaA 1515211..1516575 (-) 1365 WP_037599382.1 chromosomal replication initiator protein DnaA -
  NX99_RS06870 (NX99_06740) spo0J 1516814..1517581 (-) 768 WP_084915170.1 ParB/RepB/Spo0J family partition protein Regulator
  NX99_RS06875 (NX99_06745) htrA 1517647..1518882 (-) 1236 WP_002892211.1 S1C family serine protease Regulator
  NX99_RS06880 (NX99_06750) rlmH 1519088..1519567 (+) 480 WP_037598563.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NX99_RS06885 (NX99_06755) - 1519584..1520267 (+) 684 WP_002892206.1 YoaK family protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29380.75 Da        Isoelectric Point: 8.7216

>NTDB_id=178230 NX99_RS06870 WP_084915170.1 1516814..1517581(-) (spo0J) [Streptococcus salivarius strain ATCC 27945]
MQEQLKALPISEIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACERLGMTEIPAVVK
EVSDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPKEIQTSIENGKLSQG
HARALLSVEDTQKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=178230 NX99_RS06870 WP_084915170.1 1516814..1517581(-) (spo0J) [Streptococcus salivarius strain ATCC 27945]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGAAATCTACCCAAATCCTTTTCAACCTCGTATAGAATTCTCTGATGA
AGAATTAGCAGAACTAAGCCAATCAATCGCTGAAAATGGACTGATACAGCCAATCATTGTCCGAAAATCGGACATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTGAACGTCTGGGAATGACAGAAATCCCTGCAGTCGTAAAG
GAAGTCTCAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATTTACAACGCTCGAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGTTAGCTTACAGTCACGAGGAACTGGCAAAAGCTATGGGGAAATCCAGGCCCT
ATATCAGTAACGCTCTCAGACTCCTCCAACTTCCCAAAGAGATACAGACAAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCGCTTTTATCTGTTGAGGATACCCAAAAGCAATTAACTATCTATCATCAGGTGCTTACTGAAAAATGGTC
CGTTCGTACTCTGGAAAAAAGACTTCAAGAACTTCCTAAAAAACAAAAATCAAAAAAAGATATTCACATAAAAGATAAAG
AAAAAGAACTAGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACGGAAGAAGATTTTAACAGAATTATCAACAAGCTAATTTGA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

100

0.576

Multiple sequence alignment