Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   NX99_RS04890 Genome accession   NZ_CP015282
Coordinates   1139012..1139455 (-) Length   147 a.a.
NCBI ID   WP_002885568.1    Uniprot ID   A0A0A1DW04
Organism   Streptococcus salivarius strain ATCC 27945     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1134012..1144455
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX99_RS04875 (NX99_04790) - 1134745..1135368 (-) 624 WP_084914979.1 GNAT family N-acetyltransferase -
  NX99_RS04880 (NX99_04795) rcrQ 1135426..1137204 (-) 1779 WP_084914980.1 ABC transporter ATP-binding protein Regulator
  NX99_RS04885 (NX99_04800) rcrP 1137194..1139008 (-) 1815 WP_084914982.1 ABC transporter ATP-binding protein Regulator
  NX99_RS04890 (NX99_04805) rcrR 1139012..1139455 (-) 444 WP_002885568.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  NX99_RS04895 (NX99_04810) - 1139641..1140051 (-) 411 WP_084914984.1 peptide deformylase -
  NX99_RS04900 (NX99_04815) - 1140209..1141750 (-) 1542 WP_232313530.1 YfhO family protein -
  NX99_RS04905 (NX99_04820) gdhA 1142031..1143383 (-) 1353 WP_002885547.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17181.67 Da        Isoelectric Point: 9.3639

>NTDB_id=178213 NX99_RS04890 WP_002885568.1 1139012..1139455(-) (rcrR) [Streptococcus salivarius strain ATCC 27945]
MHGKDTFSEFREFINTMESRVQELGKVHGVEHLAGPQGFAVKYLSDNQDKEIFIKDIEKRLCISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKARDVKHFREAIHEQLLEGISKEDAETAFRVFHQIRMNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=178213 NX99_RS04890 WP_002885568.1 1139012..1139455(-) (rcrR) [Streptococcus salivarius strain ATCC 27945]
ATGCATGGAAAAGATACTTTTAGTGAATTCAGAGAATTCATCAATACTATGGAATCTCGCGTGCAAGAGTTAGGAAAGGT
CCATGGGGTTGAGCATTTAGCTGGCCCTCAAGGATTTGCTGTCAAGTATTTGTCTGACAATCAAGATAAAGAAATCTTTA
TCAAAGACATTGAAAAAAGACTATGTATTTCTAAATCAGTGGCTAGTAATTTGGTCAAACGAATGGAAAAAAATGGTTTT
GTTGAGTTGGTGACATCGGACAAGGATAAACGCTACAAGTATGTTCATCTGACAGACTTAGGTAAAAAGAAAGCTCGAGA
TGTCAAACATTTTCGAGAGGCCATCCATGAACAGCTGTTAGAAGGTATTTCCAAAGAAGATGCTGAAACAGCCTTTCGTG
TCTTTCACCAAATTCGTATGAATTTAGAAAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(37-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A1DW04

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

58.156

95.918

0.558

Multiple sequence alignment