Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   BTI679_RS21845 Genome accession   NZ_CP015257
Coordinates   4209315..4210109 (-) Length   264 a.a.
NCBI ID   WP_033656399.1    Uniprot ID   A0A6I0BK65
Organism   Bacillus wiedmannii strain Bt18679     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 4204315..4215109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTI679_RS21825 (BTI679_44280) - 4206109..4206342 (+) 234 WP_064474833.1 DUF2627 domain-containing protein -
  BTI679_RS21830 (BTI679_44290) - 4206391..4207119 (-) 729 WP_064474832.1 glycerophosphodiester phosphodiesterase -
  BTI679_RS21835 (BTI679_44300) - 4207170..4207316 (+) 147 WP_001247671.1 YycC family protein -
  BTI679_RS21840 (BTI679_44310) - 4207506..4209029 (-) 1524 WP_064474831.1 glycosyltransferase family 39 protein -
  BTI679_RS21845 (BTI679_44320) spo0A 4209315..4210109 (-) 795 WP_033656399.1 sporulation transcription factor Spo0A Regulator
  BTI679_RS21850 (BTI679_44330) spoIVB 4210397..4211695 (-) 1299 WP_002096319.1 SpoIVB peptidase -
  BTI679_RS21855 (BTI679_44340) recN 4211814..4213553 (-) 1740 WP_098111434.1 DNA repair protein RecN Machinery gene
  BTI679_RS21860 (BTI679_44350) argR 4213821..4214270 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 29440.13 Da        Isoelectric Point: 7.1176

>NTDB_id=178129 BTI679_RS21845 WP_033656399.1 4209315..4210109(-) (spo0A) [Bacillus wiedmannii strain Bt18679]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLNDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=178129 BTI679_RS21845 WP_033656399.1 4209315..4210109(-) (spo0A) [Bacillus wiedmannii strain Bt18679]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGTTAGAGAGTTACGTAGCTGCTCAAGA
TGATATGGAAGTAATTGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAATGATAAGCAGCCGGATGTACTTG
TTTTAGACATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGCTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCGAACGCTACCATTAAACGTCCAC
TTCCATCTTTCCGTTCAGCAACTACAATAGATGGAAAACCGAAAAACTTAGACGCGAGCATTACGAGTATCATTCATGAA
ATCGGTGTGCCTGCTCATATTAAAGGGTATATGTACTTAAGGGAAGCAATCTCTATGGTGTACAATGATATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGCGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCCGAGTTCATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTAGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6I0BK65

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814


Multiple sequence alignment