Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | A4U85_RS01585 | Genome accession | NZ_CP015121 |
| Coordinates | 342682..343155 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214059.1 | Uniprot ID | A0A009PK04 |
| Organism | Acinetobacter baumannii strain ab736 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 337682..348155
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4U85_RS01565 (A4U85_01550) | - | 338145..340250 (-) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
| A4U85_RS19115 | - | 340290..340420 (-) | 131 | Protein_297 | hypothetical protein | - |
| A4U85_RS01570 (A4U85_01555) | rpoZ | 340459..340737 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| A4U85_RS01575 (A4U85_01560) | gmk | 340810..341439 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| A4U85_RS01580 (A4U85_01565) | ispH | 341562..342512 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| A4U85_RS01585 (A4U85_01570) | fimU | 342682..343155 (+) | 474 | WP_001214059.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| A4U85_RS01590 (A4U85_01575) | pilV | 343149..343709 (+) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| A4U85_RS01595 (A4U85_01580) | pilW | 343710..344711 (+) | 1002 | WP_000079195.1 | PilW family protein | Machinery gene |
| A4U85_RS01600 (A4U85_01585) | pilX | 344708..345526 (+) | 819 | WP_000149377.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16837.47 Da Isoelectric Point: 9.3085
>NTDB_id=176887 A4U85_RS01585 WP_001214059.1 342682..343155(+) (fimU) [Acinetobacter baumannii strain ab736]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWKTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWKTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=176887 A4U85_RS01585 WP_001214059.1 342682..343155(+) (fimU) [Acinetobacter baumannii strain ab736]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGTCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGAAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGTCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGAAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |