Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | A4G25_RS12170 | Genome accession | NZ_CP015114 |
| Coordinates | 2535138..2535569 (+) | Length | 143 a.a. |
| NCBI ID | WP_047132356.1 | Uniprot ID | A0A143PDW9 |
| Organism | Staphylococcus condimenti strain DSM 11674 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2530138..2540569
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4G25_RS12135 (A4G25_12135) | atpD | 2530177..2531592 (+) | 1416 | WP_047132349.1 | F0F1 ATP synthase subunit beta | - |
| A4G25_RS12140 (A4G25_12140) | - | 2531613..2532020 (+) | 408 | WP_047132350.1 | F0F1 ATP synthase subunit epsilon | - |
| A4G25_RS12145 (A4G25_12145) | - | 2532200..2532433 (+) | 234 | WP_047132351.1 | DUF1146 family protein | - |
| A4G25_RS12150 (A4G25_12150) | murA | 2532544..2533815 (+) | 1272 | WP_047132352.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| A4G25_RS12155 (A4G25_12155) | - | 2533826..2534014 (+) | 189 | WP_047132353.1 | DNA-directed RNA polymerase subunit beta | - |
| A4G25_RS12160 (A4G25_12160) | fabZ | 2534018..2534455 (+) | 438 | WP_047132354.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| A4G25_RS12165 (A4G25_12165) | - | 2534506..2534949 (-) | 444 | WP_047132355.1 | YwpF family protein | - |
| A4G25_RS12170 (A4G25_12170) | ssb | 2535138..2535569 (+) | 432 | WP_047132356.1 | single-stranded DNA-binding protein | Machinery gene |
| A4G25_RS12175 (A4G25_12175) | - | 2536098..2536733 (+) | 636 | WP_047132357.1 | transglycosylase family protein | - |
| A4G25_RS12180 (A4G25_12180) | - | 2536946..2537620 (+) | 675 | WP_047132358.1 | transglycosylase family protein | - |
| A4G25_RS12185 (A4G25_12185) | - | 2537827..2538516 (+) | 690 | WP_047132359.1 | transglycosylase family protein | - |
| A4G25_RS12190 (A4G25_12190) | tenA | 2538791..2539477 (+) | 687 | WP_047132360.1 | thiaminase II | - |
| A4G25_RS12195 (A4G25_12195) | thiD | 2539474..2540295 (+) | 822 | WP_047132361.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 16040.98 Da Isoelectric Point: 7.2729
>NTDB_id=176778 A4G25_RS12170 WP_047132356.1 2535138..2535569(+) (ssb) [Staphylococcus condimenti strain DSM 11674]
MLNKIVIVGRLTRNPQLAEKEGSEIASFSVATERNYNYQGQTQQAVDYIFCKAYGKIAINIAKYTKKGSLVGITGHMRSY
KYEKDKQTHFMTELVVETIKFISNPNSNESSSSNQPTITDDFEGSPALQDHQLLSVTTDPQNQ
MLNKIVIVGRLTRNPQLAEKEGSEIASFSVATERNYNYQGQTQQAVDYIFCKAYGKIAINIAKYTKKGSLVGITGHMRSY
KYEKDKQTHFMTELVVETIKFISNPNSNESSSSNQPTITDDFEGSPALQDHQLLSVTTDPQNQ
Nucleotide
Download Length: 432 bp
>NTDB_id=176778 A4G25_RS12170 WP_047132356.1 2535138..2535569(+) (ssb) [Staphylococcus condimenti strain DSM 11674]
TTGTTAAATAAAATCGTAATTGTAGGACGATTAACTCGTAACCCTCAGTTAGCAGAAAAGGAGGGGAGTGAAATTGCCAG
TTTTAGTGTAGCCACAGAAAGAAATTATAATTATCAAGGTCAAACACAGCAAGCTGTTGATTATATTTTTTGTAAAGCGT
ATGGAAAGATAGCAATCAATATTGCTAAATACACTAAAAAAGGATCTCTTGTGGGTATTACGGGTCACATGCGTTCTTAT
AAGTATGAAAAAGATAAACAAACACATTTTATGACTGAATTAGTTGTTGAAACAATCAAATTTATTTCAAATCCAAACTC
TAATGAAAGTTCCTCTTCAAATCAACCTACTATAACTGATGACTTTGAAGGTAGCCCTGCCTTACAAGACCATCAGTTGC
TCTCAGTTACAACTGATCCTCAAAATCAGTAG
TTGTTAAATAAAATCGTAATTGTAGGACGATTAACTCGTAACCCTCAGTTAGCAGAAAAGGAGGGGAGTGAAATTGCCAG
TTTTAGTGTAGCCACAGAAAGAAATTATAATTATCAAGGTCAAACACAGCAAGCTGTTGATTATATTTTTTGTAAAGCGT
ATGGAAAGATAGCAATCAATATTGCTAAATACACTAAAAAAGGATCTCTTGTGGGTATTACGGGTCACATGCGTTCTTAT
AAGTATGAAAAAGATAAACAAACACATTTTATGACTGAATTAGTTGTTGAAACAATCAAATTTATTTCAAATCCAAACTC
TAATGAAAGTTCCTCTTCAAATCAACCTACTATAACTGATGACTTTGAAGGTAGCCCTGCCTTACAAGACCATCAGTTGC
TCTCAGTTACAACTGATCCTCAAAATCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
54.412 |
95.105 |
0.517 |
| ssb | Staphylococcus aureus MW2 |
53.676 |
95.105 |
0.51 |