Detailed information NTG0176523

Bioinformatically predicted

Overview

• Name: pilT
• Type: Machinery gene
• Locus tag: A2G07_RS03815
• Genome accession: NZ_CP015081
• Coordinates: 741854..743116 (+)
• Length: 420 a.a.
• NCBI ID: WP_010888596.1
• Uniprot ID: -
• Organism: Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 strain R1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 736854..748116

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A2G07_RS03800 (A2G07_03805)	pgeF	737666..738427 (+)	762	WP_010888599.1	peptidoglycan editing factor PgeF	-
A2G07_RS03805 (A2G07_03810)	-	738424..738948 (+)	525	WP_010888598.1	YqeG family HAD IIIA-type phosphatase	-
A2G07_RS03810 (A2G07_03815)	pilB	739128..741791 (+)	2664	WP_027479822.1	ATPase, T2SS/T4P/T4SS family	Machinery gene
A2G07_RS03815 (A2G07_03820)	pilT	741854..743116 (+)	1263	WP_010888596.1	type IV pilus twitching motility protein PilT	Machinery gene
A2G07_RS03820 (A2G07_03825)	-	743179..743691 (-)	513	WP_010888595.1	hypothetical protein	-
A2G07_RS03825 (A2G07_03830)	-	743769..744452 (-)	684	WP_028328057.1	ankyrin repeat domain-containing protein	-
A2G07_RS03830 (A2G07_03835)	-	744641..745840 (-)	1200	WP_010888593.1	acetyl-CoA C-acetyltransferase	-
A2G07_RS03835 (A2G07_03840)	-	745915..746472 (-)	558	WP_010888592.1	nucleotidyltransferase family protein	-
A2G07_RS03840 (A2G07_03845)	-	746469..747470 (-)	1002	WP_010888591.1	ADP-ribosylglycohydrolase family protein	-
A2G07_RS03845 (A2G07_03850)	-	747467..747913 (-)	447	WP_051618937.1	hypothetical protein	-

Sequence

Protein

• Length: 420 a.a.
• Molecular weight: 45066.43 Da
• Isoelectric Point: 6.7744

>NTDB_id=176523 A2G07_RS03815 WP_010888596.1 741854..743116(+) (pilT) [Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 strain R1]
MTMTSGIDITDILRLAADKGASDIILAAGLPPQFKLSGDYDAQGFEPLSASDTRKLMYSMMNERQQRIFEEKRELDFSFA
LGDKARFRVNAFMQRGNVGGVMRLIPTTVRTIAEMGLPQTVIDIANAPRGLVLVTGPTGSGKSTTLASMIDHINTTKKLH
ILTIEDPIEFMHPNKASIINQREVGSDTLSFDDALRAALRQAPDVILVGEMRDYETIKAAVTAAETGHLVMGTLHTNSAP
ESIDRIVDVFPEEQQEQIRVQLANNLVAVMTQQLLPRADGQGRVLAYEILLANPAVRALIREGKTFQITSVMQTGAREGM
VTMDAYLAGLFRRHLITYDKGLERAIDPKEFARLANDASAGLGGASMTPAAPPVPAYNSASSSSTGRGGDFGRGAAAPAT
PAAPAAGRSEPGRAGGFGRR

Nucleotide

• Length: 1263 bp

>NTDB_id=176523 A2G07_RS03815 WP_010888596.1 741854..743116(+) (pilT) [Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 strain R1]
ATGACCATGACTTCCGGCATCGACATCACCGATATCCTGCGCCTCGCCGCCGACAAGGGTGCCTCCGACATCATCCTGGC
CGCCGGGCTGCCGCCGCAGTTCAAACTCTCGGGCGACTACGACGCGCAGGGCTTCGAGCCGCTGAGCGCGAGTGACACCC
GCAAGCTGATGTACTCGATGATGAACGAGCGCCAGCAGCGCATCTTCGAGGAAAAGCGCGAACTCGACTTTTCCTTCGCG
CTCGGCGACAAGGCCCGCTTCCGCGTGAACGCCTTCATGCAGCGCGGCAACGTGGGCGGCGTGATGCGCCTCATCCCCAC
CACCGTCCGCACGATTGCCGAGATGGGGCTGCCGCAGACGGTGATCGACATCGCCAACGCGCCGCGCGGGCTGGTGCTCG
TCACCGGGCCGACGGGCTCGGGCAAATCGACCACCCTCGCCTCGATGATCGACCACATCAACACGACCAAGAAGCTGCAC
ATCCTGACCATCGAAGACCCCATCGAGTTCATGCACCCCAACAAGGCGAGCATCATCAACCAGCGCGAGGTCGGCAGCGA
CACCCTGAGCTTCGACGACGCCCTGCGCGCCGCGCTGCGTCAGGCCCCCGACGTGATTCTGGTGGGCGAAATGCGCGACT
ACGAGACCATCAAGGCCGCCGTGACCGCCGCCGAAACCGGGCACCTCGTGATGGGCACGCTGCACACCAACTCCGCGCCC
GAATCCATCGACCGCATCGTGGACGTGTTTCCCGAGGAGCAGCAGGAACAGATCCGGGTGCAGCTCGCCAACAACCTCGT
CGCCGTGATGACCCAGCAACTGCTGCCGCGCGCCGACGGGCAGGGACGCGTGCTGGCCTACGAAATCCTGCTGGCGAACC
CGGCGGTCCGCGCCCTGATCCGCGAGGGCAAAACCTTCCAGATCACCAGCGTGATGCAGACCGGCGCCCGCGAAGGCATG
GTCACGATGGACGCCTACCTCGCCGGGCTGTTCCGCCGCCATCTCATCACCTACGACAAGGGGCTGGAACGCGCCATCGA
CCCCAAGGAATTCGCCCGTCTCGCCAACGACGCTTCGGCGGGCCTCGGCGGCGCCAGCATGACGCCCGCCGCGCCGCCCG
TTCCCGCCTACAACAGCGCTTCGAGCAGCAGCACTGGGCGTGGTGGTGACTTCGGACGCGGCGCGGCGGCCCCAGCGACG
CCCGCTGCCCCTGCCGCAGGCCGCAGCGAACCGGGACGCGCCGGAGGCTTTGGCCGCCGCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (16-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	100	99.524	0.995
pilT	Neisseria meningitidis 8013	53.644	81.667	0.438
pilT	Pseudomonas stutzeri DSM 10701	52.464	82.143	0.431
pilT	Pseudomonas aeruginosa PAK	52.464	82.143	0.431
pilT	Neisseria gonorrhoeae MS11	53.392	80.714	0.431
pilT	Acinetobacter baumannii strain A118	52.174	82.143	0.429
pilT	Acinetobacter baumannii D1279779	52.174	82.143	0.429
pilT	Acinetobacter nosocomialis M2	52.174	82.143	0.429
pilT	Acinetobacter baylyi ADP1	51.884	82.143	0.426
pilT	Vibrio cholerae O1 biovar El Tor strain E7946	51.988	77.857	0.405
pilT	Vibrio cholerae strain A1552	51.988	77.857	0.405
pilT	Legionella pneumophila strain Lp02	49.275	82.143	0.405
pilT	Legionella pneumophila strain ERS1305867	49.275	82.143	0.405