Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   BSL84_RS10855 Genome accession   NZ_CP018870
Coordinates   2370501..2372423 (+) Length   640 a.a.
NCBI ID   WP_045320741.1    Uniprot ID   -
Organism   Streptomyces sp. TN58     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2365501..2377423
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSL84_RS10840 (BSL84_10840) - 2366770..2367075 (+) 306 WP_030030456.1 hypothetical protein -
  BSL84_RS10845 (BSL84_10845) - 2367171..2368619 (+) 1449 WP_075970237.1 FGGY family carbohydrate kinase -
  BSL84_RS10850 (BSL84_10850) rcrP 2368771..2370504 (+) 1734 WP_075970238.1 ABC transporter ATP-binding protein Regulator
  BSL84_RS10855 (BSL84_10855) rcrQ 2370501..2372423 (+) 1923 WP_045320741.1 ABC transporter ATP-binding protein Regulator
  BSL84_RS10860 (BSL84_10860) rpoS 2372518..2373570 (-) 1053 WP_030027846.1 RNA polymerase sigma factor Regulator
  BSL84_RS10865 (BSL84_10865) - 2374047..2376122 (-) 2076 WP_030027845.1 molybdopterin oxidoreductase family protein -
  BSL84_RS10870 (BSL84_10870) - 2376190..2376552 (-) 363 WP_234363443.1 hypothetical protein -
  BSL84_RS10875 (BSL84_10875) - 2376702..2377415 (-) 714 WP_045320743.1 SanA/YdcF family protein -

Sequence

Protein


Download         Length: 640 a.a.        Molecular weight: 69061.44 Da        Isoelectric Point: 5.2012

>NTDB_id=176512 BSL84_RS10855 WP_045320741.1 2370501..2372423(+) (rcrQ) [Streptomyces sp. TN58]
MSGPGGRMMMGPAQRSLDFRGSGRRLLAQLAQDRAKLWGMVLAVVGSVACAVVGPKILGEATDLVFAGIVGREMPAGVTK
QQALEAMRARGDEGMADMLSGTDFTPGQGIDFGAVGVVAIWALVVFTLAGLLMLVATRLSNHVMNGTLYRMREELQAKLS
RLPLSYFDQQKRGEVLSRATNDIDNIGQTLQQTMGQLLNSLLTIVGVLAMMFWISPLLALVAVGTVPVSVYVAAKIGKKS
QPQFVEQWKTTGTLNAHIEEMYSGHNLVKVFGRQKESAAVFAEQNEALYRASFKAQLVSGIMQPVMFFISNINYVLIAVV
GGLRVASGSLSIGDVQAFIQYSRQFSMPLTQVASMANLVQSGVASAERVYELLDAPEQERDADVPERPRELRGQVTFDKV
AFRYEPDRPLIENLSLSVEPGHTVAIVGPTGAGKTTLVNLLMRFYEVTGGEIALDGVDIAKMTREELRGGIGMVLQDTWL
FGGTIAENIAYGASREVTRAEIEEAARAAHADRFIRTLPDGYDTVLDDEGSGVSAGEKQLITIARAFLSDPVILVLDEAT
SSVDTRTEVLIQKAMARLAHGRTSFVIAHRLSTIRDADVILVMESGSIVEQGTHEELLASGGAYARLYAAQFAQAVAEVD

Nucleotide


Download         Length: 1923 bp        

>NTDB_id=176512 BSL84_RS10855 WP_045320741.1 2370501..2372423(+) (rcrQ) [Streptomyces sp. TN58]
ATGAGCGGGCCCGGAGGACGGATGATGATGGGGCCGGCCCAGCGGTCCCTGGACTTCAGGGGATCGGGCAGGCGGCTGCT
GGCCCAGCTCGCGCAGGACCGGGCCAAGCTGTGGGGCATGGTCCTCGCCGTTGTCGGCAGCGTCGCCTGCGCCGTCGTCG
GACCGAAGATCCTCGGCGAGGCGACCGACCTGGTCTTCGCGGGGATCGTGGGCCGGGAGATGCCGGCCGGCGTGACCAAG
CAGCAGGCGCTGGAGGCGATGCGCGCCCGCGGTGACGAGGGCATGGCGGACATGCTGTCCGGCACCGACTTCACCCCCGG
ACAGGGCATCGACTTCGGCGCCGTCGGGGTCGTGGCGATCTGGGCGCTGGTGGTCTTCACCCTGGCCGGCCTGCTGATGC
TGGTCGCGACCCGGCTGTCGAACCACGTCATGAACGGCACCCTGTACCGGATGCGCGAGGAGCTCCAGGCAAAGCTGTCG
CGGCTGCCGCTGTCGTACTTCGACCAGCAGAAGCGCGGCGAGGTGCTGAGCCGGGCCACCAACGACATAGACAACATCGG
CCAGACGCTGCAGCAGACGATGGGTCAGCTGCTGAACTCGCTGCTGACGATCGTCGGCGTGCTGGCCATGATGTTCTGGA
TCTCGCCGCTGCTGGCGCTGGTCGCGGTGGGGACCGTACCGGTCTCCGTCTACGTCGCCGCGAAGATCGGCAAGAAGTCG
CAGCCGCAGTTCGTGGAGCAGTGGAAGACGACCGGCACGCTCAACGCCCACATCGAGGAGATGTACTCGGGGCACAACCT
GGTCAAGGTCTTCGGCCGGCAGAAGGAGTCCGCGGCGGTCTTCGCCGAGCAGAACGAGGCGCTGTACCGGGCCTCCTTCA
AGGCCCAGCTGGTCAGCGGCATCATGCAGCCGGTGATGTTCTTCATCTCGAACATCAACTACGTGCTGATCGCGGTGGTC
GGCGGGCTGCGGGTCGCCTCCGGCAGCCTGTCGATCGGTGACGTGCAGGCCTTCATCCAGTACTCGCGGCAGTTCTCGAT
GCCGCTGACGCAGGTCGCGTCGATGGCGAACCTGGTGCAGTCCGGTGTCGCCTCGGCGGAGCGGGTCTACGAGCTGCTGG
ACGCCCCGGAGCAGGAGCGCGACGCCGACGTGCCGGAGCGCCCCCGGGAGCTGCGCGGACAGGTCACCTTCGACAAGGTG
GCCTTCCGCTACGAGCCGGACCGGCCGCTCATCGAGAACCTGTCGCTCTCGGTGGAGCCGGGCCACACGGTCGCGATCGT
CGGCCCGACGGGTGCCGGCAAGACGACCCTGGTGAACCTGCTGATGCGGTTCTACGAGGTCACGGGCGGCGAGATCGCCC
TCGACGGGGTGGACATCGCCAAGATGACCCGCGAGGAGCTGCGCGGCGGCATCGGCATGGTGCTGCAGGACACCTGGCTG
TTCGGCGGCACCATCGCGGAGAACATCGCCTACGGTGCCTCGCGCGAGGTGACGCGTGCCGAGATCGAGGAGGCGGCGCG
GGCGGCGCACGCGGACCGGTTCATCCGGACGCTGCCGGACGGCTACGACACGGTGCTGGACGACGAGGGTTCGGGGGTCA
GCGCGGGCGAGAAGCAGCTGATCACCATCGCCCGGGCGTTCCTGTCGGATCCGGTGATCCTGGTCCTCGACGAGGCGACG
AGCTCGGTGGACACCCGTACCGAGGTGCTGATCCAGAAGGCGATGGCGCGGCTGGCGCACGGCCGTACGTCCTTCGTGAT
CGCGCACCGGCTCTCCACGATCCGCGACGCCGACGTGATCCTGGTGATGGAGAGCGGTTCGATCGTGGAGCAGGGCACGC
ACGAGGAGCTGCTGGCGTCGGGCGGTGCCTACGCTCGGCTGTACGCGGCGCAGTTCGCCCAGGCGGTCGCCGAGGTCGAC
TGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(412-561)

ABC transporter transmembrane region (ABC_membrane)

(56-349)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.968

96.563

0.386