Detailed information NTG0176389

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BUM80_RS08715
• Genome accession: NZ_CP018838
• Coordinates: 1599631..1600728 (+)
• Length: 365 a.a.
• NCBI ID: WP_100910936.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 11A
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1594631..1605728

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BUM80_RS08690 (BUM80_08905)	pgsA	1595152..1595697 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
BUM80_RS08695 (BUM80_08910)	rodZ	1595708..1596529 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
BUM80_RS08700 (BUM80_08915)	yfmH	1596571..1597854 (-)	1284	WP_000170191.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
BUM80_RS08705 (BUM80_08920)	yfmF	1597851..1599101 (-)	1251	WP_000424269.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
BUM80_RS08710 (BUM80_08925)	-	1599260..1599628 (+)	369	WP_000455898.1	RNA-binding S4 domain-containing protein	-
BUM80_RS08715 (BUM80_08930)	recF	1599631..1600728 (+)	1098	WP_100910936.1	DNA replication/repair protein RecF	Machinery gene
BUM80_RS08720 (BUM80_08935)	guaB	1600778..1602256 (-)	1479	WP_100910937.1	IMP dehydrogenase	-
BUM80_RS08725 (BUM80_08940)	trpS	1602408..1603433 (-)	1026	WP_100910938.1	tryptophan--tRNA ligase	-
BUM80_RS08730 (BUM80_08945)	-	1603639..1605261 (+)	1623	WP_000958769.1	ABC-F family ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 42028.25 Da
• Isoelectric Point: 9.3018

>NTDB_id=176389 BUM80_RS08715 WP_100910936.1 1599631..1600728(+) (recF) [Streptococcus pneumoniae strain 11A]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKVIVNKT

Nucleotide

• Length: 1098 bp

>NTDB_id=176389 BUM80_RS08715 WP_100910936.1 1599631..1600728(+) (recF) [Streptococcus pneumoniae strain 11A]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAAGATGGTAAAGTTATTGTAAATAAAACTTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.449	99.452	0.989
recF	Bacillus subtilis subsp. subtilis str. 168	45.528	100	0.46