Detailed information    

insolico Bioinformatically predicted

Overview


Name   xerS   Type   Machinery gene
Locus tag   BTR42_RS06050 Genome accession   NZ_CP018822
Coordinates   1194311..1195381 (+) Length   356 a.a.
NCBI ID   WP_003064732.1    Uniprot ID   A0A1H9NID7
Organism   Streptococcus gallolyticus subsp. gallolyticus DSM 16831     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1189311..1200381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTR42_RS06030 (BTR42_05720) - 1189556..1191289 (+) 1734 WP_077496842.1 ABC transporter ATP-binding protein -
  BTR42_RS06035 (BTR42_05725) - 1191304..1191891 (+) 588 WP_061100431.1 MptD family putative ECF transporter S component -
  BTR42_RS06040 (BTR42_05730) - 1191964..1192662 (+) 699 WP_077496844.1 energy-coupling factor transporter transmembrane component T -
  BTR42_RS06045 (BTR42_05735) - 1192655..1194040 (+) 1386 WP_077496846.1 ABC transporter ATP-binding protein -
  BTR42_RS06050 (BTR42_05740) xerS 1194311..1195381 (+) 1071 WP_003064732.1 tyrosine recombinase XerS Machinery gene
  BTR42_RS06055 (BTR42_05745) - 1195487..1196167 (-) 681 WP_009854191.1 LexA family transcriptional regulator -
  BTR42_RS06060 (BTR42_05750) - 1196251..1197198 (-) 948 WP_077496848.1 sensor histidine kinase -
  BTR42_RS06065 (BTR42_05755) braR 1197195..1197857 (-) 663 WP_174564803.1 response regulator transcription factor Regulator
  BTR42_RS06070 (BTR42_05760) - 1197945..1199924 (-) 1980 WP_077496851.1 FtsX-like permease family protein -

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 41334.41 Da        Isoelectric Point: 9.4174

>NTDB_id=176201 BTR42_RS06050 WP_003064732.1 1194311..1195381(+) (xerS) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
MKREKLLEKIDELKEIMPWYVLDYYQSKLSVPYSFTTLYEYLKEYRRFFEWLLDSGISDVTKIADVELTTLEHLSKKDME
SFILYLRERPSLNTYSTKQGVSQTTINRTLSALSSLFKYLTEEVEDENGEPYFYRNVMKKIATKKKKETLAARAENIKGK
LFLGDETMAFIDYIDTEYQNKLSHRALSSFQKNKERDLALIALLLASGVRLSEAVNLDLKDLNLNMMVIEVTRKGGKRDS
VNVANFAKPYLEAYLQIRAPRYKAEKQDQALFLTEYRGVPNRIDASSVEKLVAKYSQDFKVRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=176201 BTR42_RS06050 WP_003064732.1 1194311..1195381(+) (xerS) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
ATGAAACGTGAAAAATTACTTGAAAAAATTGATGAACTTAAAGAAATAATGCCTTGGTACGTCTTAGACTATTACCAATC
AAAACTTTCGGTTCCTTATAGTTTCACAACTTTATATGAATACTTAAAAGAATATCGCCGATTTTTCGAATGGCTTTTGG
ATTCTGGAATTTCAGATGTTACTAAAATTGCTGACGTTGAATTAACGACTCTGGAACATCTTTCTAAAAAAGACATGGAA
TCATTCATCCTTTATCTGCGTGAACGTCCTTCTTTGAACACTTATTCAACAAAACAAGGTGTCTCACAAACAACAATTAA
TCGGACGTTATCAGCACTTTCAAGCCTGTTTAAATACCTAACAGAAGAGGTCGAAGATGAAAATGGTGAGCCCTACTTCT
ATCGAAATGTCATGAAAAAAATCGCTACTAAGAAGAAAAAAGAAACGCTGGCAGCTCGAGCTGAAAATATAAAAGGCAAA
CTTTTTCTAGGTGACGAGACCATGGCATTTATCGACTATATCGATACAGAGTATCAAAATAAGCTCTCTCACCGCGCTCT
CTCCTCCTTCCAAAAGAATAAGGAGCGTGATTTAGCGCTTATTGCTCTTCTGCTTGCCTCTGGTGTCCGTCTTTCAGAAG
CTGTTAATCTTGATTTGAAAGACTTAAACCTTAATATGATGGTTATCGAAGTCACTCGTAAAGGTGGAAAACGTGATTCT
GTCAATGTTGCTAACTTTGCTAAGCCTTATTTAGAAGCTTATTTGCAAATCAGAGCGCCTCGCTATAAGGCGGAAAAACA
AGACCAAGCTCTCTTTTTAACAGAATATCGCGGTGTTCCTAACCGTATTGATGCTTCAAGCGTTGAAAAGTTAGTTGCTA
AATACTCTCAAGATTTCAAAGTTCGTGTAACACCCCACAAACTGCGCCACACACTTGCAACACGTCTTTACGATGCTACT
AAATCACAAGTCCTAGTTAGCCACCAATTAGGACATGCCAGTACACAAGTTACCGACTTATACACCCATATTGTCAACGA
CGAACAAAAAAATGCCTTAGATAAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1H9NID7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

83.427

100

0.834


Multiple sequence alignment