Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BTR42_RS06065 Genome accession   NZ_CP018822
Coordinates   1197195..1197857 (-) Length   220 a.a.
NCBI ID   WP_174564803.1    Uniprot ID   -
Organism   Streptococcus gallolyticus subsp. gallolyticus DSM 16831     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1192195..1202857
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTR42_RS06045 (BTR42_05735) - 1192655..1194040 (+) 1386 WP_077496846.1 ABC transporter ATP-binding protein -
  BTR42_RS06050 (BTR42_05740) xerS 1194311..1195381 (+) 1071 WP_003064732.1 tyrosine recombinase XerS Machinery gene
  BTR42_RS06055 (BTR42_05745) - 1195487..1196167 (-) 681 WP_009854191.1 LexA family transcriptional regulator -
  BTR42_RS06060 (BTR42_05750) - 1196251..1197198 (-) 948 WP_077496848.1 sensor histidine kinase -
  BTR42_RS06065 (BTR42_05755) braR 1197195..1197857 (-) 663 WP_174564803.1 response regulator transcription factor Regulator
  BTR42_RS06070 (BTR42_05760) - 1197945..1199924 (-) 1980 WP_077496851.1 FtsX-like permease family protein -
  BTR42_RS06075 (BTR42_05765) - 1199926..1200678 (-) 753 WP_009854195.1 ABC transporter ATP-binding protein -
  BTR42_RS06080 (BTR42_05770) - 1201174..1202004 (-) 831 WP_077496853.1 sugar phosphate isomerase/epimerase family protein -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 25435.04 Da        Isoelectric Point: 4.6535

>NTDB_id=176202 BTR42_RS06065 WP_174564803.1 1197195..1197857(-) (braR) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
MKQGKIYIVEDDETIVKLLEQHLSQTYDVFSVTNFRAIKQEVEEIKPDLILIDITLPYFNGFYWTTEIRKTMTLPIIFIS
SSDDEMDTVMALNMGGDDFVSKPFSLTILDAKISAFLRRAYQFTSDNYQLDQFSLSRDGILSNGDDHITLSPTENKILAV
LFEHQNQVVPKEELLEKLWENESFIDQNTLSVNITRLRKKTQPLGFDRIHTVRGVGYLLK

Nucleotide


Download         Length: 663 bp        

>NTDB_id=176202 BTR42_RS06065 WP_174564803.1 1197195..1197857(-) (braR) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
ATGAAACAAGGAAAGATTTATATTGTCGAGGACGATGAAACTATCGTTAAACTTTTAGAACAACATCTTAGTCAAACTTA
TGATGTCTTTAGTGTCACTAATTTTCGAGCTATTAAGCAGGAAGTCGAAGAAATCAAGCCTGACCTTATCCTGATTGATA
TCACGTTGCCGTATTTTAATGGTTTTTATTGGACAACAGAAATTCGTAAAACTATGACATTGCCGATTATTTTTATCTCA
TCTAGTGATGATGAAATGGATACTGTCATGGCACTTAACATGGGAGGGGATGATTTTGTGTCAAAACCATTTTCTCTAAC
GATTTTAGACGCCAAAATTTCAGCCTTTTTAAGACGTGCTTACCAGTTTACCTCGGATAATTACCAATTGGACCAGTTTT
CTCTGTCGCGTGACGGAATTTTATCAAACGGTGACGACCATATCACCTTATCTCCGACAGAAAATAAGATTTTAGCGGTT
CTCTTTGAACATCAAAATCAAGTCGTGCCCAAAGAGGAATTACTCGAGAAACTTTGGGAAAATGAAAGTTTCATTGACCA
AAATACCCTTAGCGTTAACATAACACGACTGCGCAAGAAAACACAACCATTAGGTTTTGATCGTATTCACACCGTGAGAG
GAGTTGGCTACCTTCTAAAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-219)

Response regulator receiver domain (Response_reg)

(6-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

46.33

99.091

0.459
  vicR Streptococcus mutans UA159

33.898

100

0.364