Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   BTR42_RS02390 Genome accession   NZ_CP018822
Coordinates   427510..428544 (+) Length   344 a.a.
NCBI ID   WP_077496228.1    Uniprot ID   -
Organism   Streptococcus gallolyticus subsp. gallolyticus DSM 16831     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 422510..433544
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTR42_RS02360 (BTR42_02055) tsaE 423719..424162 (+) 444 WP_009853432.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  BTR42_RS02365 (BTR42_02060) - 424155..424667 (+) 513 Protein_405 N-acetyltransferase family protein -
  BTR42_RS02370 (BTR42_02065) brpA 424678..425835 (+) 1158 WP_009853434.1 biofilm formation/cell division transcriptional regulator BrpA -
  BTR42_RS02375 (BTR42_02070) - 426001..426303 (-) 303 WP_077496226.1 hypothetical protein -
  BTR42_RS02380 (BTR42_02075) - 426300..426719 (-) 420 WP_061459029.1 HIT family protein -
  BTR42_RS02385 (BTR42_02080) pptA 426783..427508 (+) 726 WP_009853437.1 ABC transporter ATP-binding protein Regulator
  BTR42_RS02390 (BTR42_02085) pptB 427510..428544 (+) 1035 WP_077496228.1 ABC transporter permease Regulator
  BTR42_RS02395 (BTR42_02090) ccrZ 428609..429403 (+) 795 WP_012961430.1 cell cycle regulator CcrZ -
  BTR42_RS02400 (BTR42_02095) trmB 429403..430041 (+) 639 WP_003063401.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  BTR42_RS02410 (BTR42_02100) - 430384..431409 (+) 1026 WP_077496230.1 sensor domain-containing diguanylate cyclase -
  BTR42_RS02415 (BTR42_02105) - 431415..432482 (+) 1068 WP_077496232.1 bifunctional glycosyltransferase family 2/GtrA family protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 39712.76 Da        Isoelectric Point: 10.5034

>NTDB_id=176168 BTR42_RS02390 WP_077496228.1 427510..428544(+) (pptB) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
MKEVFQKRRSAFLGQCLKYLRYVFNDHFVLVLVFLTGFLMVQYSQLLRQFPSQTVVIDVILVLVILVLLSLGKIATYLEA
PDKLFYLPKEIEILQWLSQARRRAFVIWTIVQTVILVLLAPIFFKLGFSTVTFGILLLALAVVKWLVMKEKSKVFFSQGK
FSWDAAISYEAKRRQGVLKFFSLFTTVKGISASVKRRSYLDGLLGLVKKTHAETWSNLYLRAFLRSSDYFALTLRLLALS
LLALIFISNRLVAVGLALVFNYLLLFQLLTLSQHFDYQYLTSLYPISEKQKAANLKTFLKKLSYLLGFLELLLTFSWQAA
GLLVLVTVIITEWYLPYKINKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=176168 BTR42_RS02390 WP_077496228.1 427510..428544(+) (pptB) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
ATGAAAGAAGTTTTTCAAAAGCGCCGTAGTGCTTTTTTAGGGCAATGCTTAAAGTATCTTCGTTATGTTTTTAATGACCA
TTTTGTGCTAGTCTTGGTTTTCTTAACAGGTTTTCTGATGGTTCAATACAGCCAGCTGTTACGTCAGTTTCCAAGTCAGA
CAGTCGTTATTGACGTGATTTTGGTCTTGGTTATCCTTGTTTTGCTTAGCCTTGGGAAGATTGCGACTTATTTGGAAGCA
CCTGATAAATTGTTCTATTTGCCAAAAGAAATTGAGATTTTGCAATGGCTATCACAGGCAAGACGTCGTGCTTTTGTGAT
TTGGACGATCGTGCAAACGGTAATTCTTGTCTTATTAGCTCCTATCTTCTTTAAACTAGGTTTTTCAACGGTTACCTTTG
GCATTTTATTGCTTGCTTTAGCGGTTGTGAAATGGCTTGTAATGAAAGAAAAAAGCAAGGTATTCTTTTCTCAAGGAAAA
TTTTCATGGGATGCTGCCATTTCTTATGAAGCAAAACGTCGTCAAGGAGTGCTTAAATTCTTTTCACTTTTCACAACGGT
TAAGGGAATTTCAGCTAGTGTGAAACGTCGTTCGTATTTGGATGGTCTGCTTGGTTTGGTCAAAAAAACACATGCCGAAA
CATGGTCAAATTTGTACCTACGTGCGTTTTTACGGAGTTCAGATTATTTTGCTTTAACCTTGCGATTACTCGCATTGAGC
TTGCTTGCGCTTATCTTTATTTCTAATCGCTTGGTAGCAGTTGGCTTGGCTTTGGTCTTTAATTATTTATTACTTTTTCA
ATTATTAACCCTATCCCAACATTTTGATTATCAATATTTGACCAGTCTTTATCCAATTTCTGAAAAGCAAAAGGCGGCTA
ATTTAAAGACATTTTTGAAAAAATTATCGTATTTACTGGGCTTTTTGGAGTTGTTATTAACGTTTTCTTGGCAAGCAGCG
GGCTTGTTGGTTTTGGTAACGGTTATTATTACAGAATGGTATCTTCCTTACAAAATCAATAAGATGATTGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

45.93

100

0.459

  pptB Streptococcus salivarius strain HSISS4

45.93

100

0.459