Detailed information NTG0175745

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: A2I97_RS01970
• Genome accession: NZ_CP014990
• Coordinates: 383217..384365 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain KD1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 378217..389365

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A2I97_RS01950 (A2I97_01905)	-	378614..379297 (-)	684	WP_070081357.1	ABC transporter ATP-binding protein	-
A2I97_RS01955 (A2I97_01910)	-	379312..380748 (-)	1437	WP_070081358.1	ABC transporter permease	-
A2I97_RS01960 (A2I97_01915)	-	380961..381644 (+)	684	WP_070081359.1	response regulator transcription factor	-
A2I97_RS01965 (A2I97_01920)	-	381631..383064 (+)	1434	WP_161941456.1	sensor histidine kinase	-
A2I97_RS01970 (A2I97_01925)	rapC	383217..384365 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
A2I97_RS01975 (A2I97_01930)	phrC	384349..384468 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
A2I97_RS01980 (A2I97_18975)	-	384618..384728 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
A2I97_RS01985 (A2I97_01935)	-	384808..386172 (-)	1365	WP_070081361.1	aspartate kinase	-
A2I97_RS01990 (A2I97_01940)	ceuB	386587..387540 (+)	954	WP_003156332.1	ABC transporter permease	Machinery gene
A2I97_RS01995 (A2I97_01945)	-	387530..388477 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
A2I97_RS02000 (A2I97_01950)	-	388471..389229 (+)	759	WP_022552588.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=175745 A2I97_RS01970 WP_003156336.1 383217..384365(+) (rapC) [Bacillus velezensis strain KD1]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=175745 A2I97_RS01970 WP_003156336.1 383217..384365(+) (rapC) [Bacillus velezensis strain KD1]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACGTATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCAGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTTTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
CCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGACGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568