Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | AYR61_RS10545 | Genome accession | NZ_CP014912 |
| Coordinates | 2421991..2423811 (+) | Length | 606 a.a. |
| NCBI ID | WP_156770479.1 | Uniprot ID | - |
| Organism | Secundilactobacillus paracollinoides strain TMW 1.1979 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2416991..2428811
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYR61_RS10520 (AYR61_10565) | - | 2417711..2418211 (-) | 501 | WP_054712375.1 | hypothetical protein | - |
| AYR61_RS10525 (AYR61_10570) | - | 2418322..2419065 (+) | 744 | WP_065902916.1 | MBL fold metallo-hydrolase | - |
| AYR61_RS10530 (AYR61_10575) | spx | 2419190..2419594 (+) | 405 | WP_056987194.1 | transcriptional regulator Spx | - |
| AYR61_RS10535 (AYR61_10580) | - | 2419755..2420480 (+) | 726 | WP_056987193.1 | adaptor protein MecA | - |
| AYR61_RS10540 (AYR61_10585) | - | 2420850..2421917 (+) | 1068 | WP_065902918.1 | competence protein CoiA | - |
| AYR61_RS10545 (AYR61_10590) | pepF | 2421991..2423811 (+) | 1821 | WP_156770479.1 | oligoendopeptidase F | Regulator |
| AYR61_RS10550 (AYR61_10595) | - | 2424429..2425067 (-) | 639 | WP_156319346.1 | DsbA family protein | - |
| AYR61_RS10555 (AYR61_10600) | - | 2425352..2426035 (+) | 684 | WP_065903912.1 | GTP pyrophosphokinase family protein | - |
| AYR61_RS10560 (AYR61_10605) | - | 2426032..2426835 (+) | 804 | WP_065902922.1 | NAD kinase | - |
| AYR61_RS10565 (AYR61_10610) | - | 2426828..2427727 (+) | 900 | WP_054711344.1 | RluA family pseudouridine synthase | - |
Sequence
Protein
Download Length: 606 a.a. Molecular weight: 68722.38 Da Isoelectric Point: 4.6368
>NTDB_id=175106 AYR61_RS10545 WP_156770479.1 2421991..2423811(+) (pepF) [Secundilactobacillus paracollinoides strain TMW 1.1979]
MADVKQLPTRDEVDPKFTWDLTPIYATTADFEGDFNKVQEAIPELEDLRGSLATGADQLLHAIQSILSVIRRAEKVYVYA
SLKHDENTGNAENQALSGRTQTLFTSLESAIAWFEPELLAIDKATLDNMLAQNSTLGEYKHYLDTITDQRDHVLAPNEEK
LLAQAGDALGTASNTFGVLNDADLEFPVVEDNDGQAVQLSQGVYDQLIQSTKPAVREMAFKQLYAVYHQFRHTLASTLAG
NVKTHNFNAQVRHYADAREAALSGNHIPVSVYDTLVKAVNAHLPLLHRYVALRKRILGLSDLHMYDLYTPITGEPQLTYT
YETARDEALKALDVMGPDYLSHVKTAFDSRWIDVVENQGKRSGGYSSGMYDTAPYILLNWQDNLESLYTLVHEMGHSMHS
YYSSHNQPYQYGDYSIFVAEIASTTNETLLTDYLLKTYDEPQVQAFVLNHYLDGFKGTVFRQTQFAEFEQFIHEEDAAGH
PLTADHLSDYYLKLNQRYYGDAVQSDPEIADEWARIPHFYYNYYVYQYATGFAAANTLADRILSGDTSKRDAYLNYLKSG
SSDYPIEVMKKAGVDMSQETYLDQAFDQFEARLNQFEKLVEREGKR
MADVKQLPTRDEVDPKFTWDLTPIYATTADFEGDFNKVQEAIPELEDLRGSLATGADQLLHAIQSILSVIRRAEKVYVYA
SLKHDENTGNAENQALSGRTQTLFTSLESAIAWFEPELLAIDKATLDNMLAQNSTLGEYKHYLDTITDQRDHVLAPNEEK
LLAQAGDALGTASNTFGVLNDADLEFPVVEDNDGQAVQLSQGVYDQLIQSTKPAVREMAFKQLYAVYHQFRHTLASTLAG
NVKTHNFNAQVRHYADAREAALSGNHIPVSVYDTLVKAVNAHLPLLHRYVALRKRILGLSDLHMYDLYTPITGEPQLTYT
YETARDEALKALDVMGPDYLSHVKTAFDSRWIDVVENQGKRSGGYSSGMYDTAPYILLNWQDNLESLYTLVHEMGHSMHS
YYSSHNQPYQYGDYSIFVAEIASTTNETLLTDYLLKTYDEPQVQAFVLNHYLDGFKGTVFRQTQFAEFEQFIHEEDAAGH
PLTADHLSDYYLKLNQRYYGDAVQSDPEIADEWARIPHFYYNYYVYQYATGFAAANTLADRILSGDTSKRDAYLNYLKSG
SSDYPIEVMKKAGVDMSQETYLDQAFDQFEARLNQFEKLVEREGKR
Nucleotide
Download Length: 1821 bp
>NTDB_id=175106 AYR61_RS10545 WP_156770479.1 2421991..2423811(+) (pepF) [Secundilactobacillus paracollinoides strain TMW 1.1979]
TTGGCAGACGTCAAACAATTACCAACTCGTGATGAAGTAGATCCCAAATTCACGTGGGATCTCACACCAATTTATGCAAC
AACAGCCGACTTTGAAGGTGACTTCAACAAGGTCCAGGAGGCGATTCCTGAATTAGAAGACCTTCGTGGCTCTCTAGCGA
CTGGTGCTGATCAGCTGCTGCATGCGATCCAAAGCATTCTTAGCGTGATTCGACGAGCGGAAAAAGTCTATGTTTACGCG
TCTTTAAAGCACGATGAAAACACCGGAAATGCTGAGAATCAAGCGCTAAGCGGCCGAACGCAAACCTTATTTACCAGTCT
TGAAAGTGCCATTGCGTGGTTTGAACCAGAACTGCTGGCCATTGATAAGGCAACACTTGACAACATGCTGGCCCAAAACA
GTACCCTCGGTGAATACAAACACTATCTCGATACGATTACGGATCAGCGAGATCACGTTTTGGCCCCCAACGAAGAAAAA
TTATTGGCCCAAGCTGGAGATGCACTCGGGACGGCAAGTAACACGTTTGGCGTGTTAAATGATGCTGACCTGGAATTCCC
CGTTGTGGAAGATAATGATGGTCAGGCCGTTCAACTGTCTCAGGGTGTGTATGATCAGTTGATTCAATCCACCAAACCAG
CCGTACGTGAAATGGCCTTTAAACAGCTCTATGCCGTTTATCACCAATTCCGCCATACATTGGCTTCAACACTGGCTGGC
AACGTTAAAACGCATAATTTCAACGCTCAGGTGCGTCATTATGCTGATGCCCGTGAGGCAGCGTTGAGTGGCAATCACAT
CCCTGTGAGTGTGTATGACACGCTCGTCAAGGCGGTCAACGCCCATTTACCGTTACTGCACCGTTATGTGGCGCTTCGAA
AACGAATCTTGGGGTTGTCGGACCTTCATATGTATGATCTGTATACGCCAATTACCGGGGAACCACAATTAACCTACACC
TACGAGACTGCTCGTGATGAAGCACTTAAAGCTTTAGATGTGATGGGACCTGACTATCTATCCCACGTTAAAACAGCCTT
TGATTCACGCTGGATCGATGTTGTTGAGAACCAGGGAAAGCGTTCTGGTGGGTATTCATCTGGCATGTACGACACGGCAC
CGTATATTTTGCTGAACTGGCAGGATAATTTGGAAAGTTTGTACACCTTGGTTCATGAAATGGGTCACAGTATGCACAGC
TATTACAGTAGTCACAACCAGCCATATCAGTATGGCGACTATTCCATTTTCGTTGCCGAGATTGCATCCACGACTAATGA
AACGTTGTTGACGGACTATCTGCTGAAGACTTACGACGAGCCACAAGTTCAGGCCTTTGTGTTAAATCATTACCTGGACG
GCTTTAAGGGGACTGTCTTCCGCCAGACTCAGTTTGCTGAATTTGAGCAATTTATTCACGAGGAAGATGCAGCGGGACAC
CCGTTGACGGCGGATCATTTGAGTGATTACTATCTGAAGCTTAATCAGCGTTACTACGGTGATGCTGTTCAGTCTGATCC
GGAGATTGCGGACGAATGGGCCCGAATCCCGCATTTCTACTATAACTACTATGTTTACCAGTACGCCACCGGCTTCGCGG
CAGCGAATACGCTGGCAGACCGGATCCTTTCTGGGGACACTAGCAAGCGCGATGCTTATCTGAATTACCTGAAGTCGGGC
AGTTCTGATTATCCGATCGAAGTGATGAAGAAGGCGGGCGTAGACATGTCACAAGAGACCTATCTCGACCAGGCGTTTGA
CCAGTTTGAAGCACGGTTGAATCAGTTTGAAAAATTGGTAGAGCGTGAAGGAAAACGGTAG
TTGGCAGACGTCAAACAATTACCAACTCGTGATGAAGTAGATCCCAAATTCACGTGGGATCTCACACCAATTTATGCAAC
AACAGCCGACTTTGAAGGTGACTTCAACAAGGTCCAGGAGGCGATTCCTGAATTAGAAGACCTTCGTGGCTCTCTAGCGA
CTGGTGCTGATCAGCTGCTGCATGCGATCCAAAGCATTCTTAGCGTGATTCGACGAGCGGAAAAAGTCTATGTTTACGCG
TCTTTAAAGCACGATGAAAACACCGGAAATGCTGAGAATCAAGCGCTAAGCGGCCGAACGCAAACCTTATTTACCAGTCT
TGAAAGTGCCATTGCGTGGTTTGAACCAGAACTGCTGGCCATTGATAAGGCAACACTTGACAACATGCTGGCCCAAAACA
GTACCCTCGGTGAATACAAACACTATCTCGATACGATTACGGATCAGCGAGATCACGTTTTGGCCCCCAACGAAGAAAAA
TTATTGGCCCAAGCTGGAGATGCACTCGGGACGGCAAGTAACACGTTTGGCGTGTTAAATGATGCTGACCTGGAATTCCC
CGTTGTGGAAGATAATGATGGTCAGGCCGTTCAACTGTCTCAGGGTGTGTATGATCAGTTGATTCAATCCACCAAACCAG
CCGTACGTGAAATGGCCTTTAAACAGCTCTATGCCGTTTATCACCAATTCCGCCATACATTGGCTTCAACACTGGCTGGC
AACGTTAAAACGCATAATTTCAACGCTCAGGTGCGTCATTATGCTGATGCCCGTGAGGCAGCGTTGAGTGGCAATCACAT
CCCTGTGAGTGTGTATGACACGCTCGTCAAGGCGGTCAACGCCCATTTACCGTTACTGCACCGTTATGTGGCGCTTCGAA
AACGAATCTTGGGGTTGTCGGACCTTCATATGTATGATCTGTATACGCCAATTACCGGGGAACCACAATTAACCTACACC
TACGAGACTGCTCGTGATGAAGCACTTAAAGCTTTAGATGTGATGGGACCTGACTATCTATCCCACGTTAAAACAGCCTT
TGATTCACGCTGGATCGATGTTGTTGAGAACCAGGGAAAGCGTTCTGGTGGGTATTCATCTGGCATGTACGACACGGCAC
CGTATATTTTGCTGAACTGGCAGGATAATTTGGAAAGTTTGTACACCTTGGTTCATGAAATGGGTCACAGTATGCACAGC
TATTACAGTAGTCACAACCAGCCATATCAGTATGGCGACTATTCCATTTTCGTTGCCGAGATTGCATCCACGACTAATGA
AACGTTGTTGACGGACTATCTGCTGAAGACTTACGACGAGCCACAAGTTCAGGCCTTTGTGTTAAATCATTACCTGGACG
GCTTTAAGGGGACTGTCTTCCGCCAGACTCAGTTTGCTGAATTTGAGCAATTTATTCACGAGGAAGATGCAGCGGGACAC
CCGTTGACGGCGGATCATTTGAGTGATTACTATCTGAAGCTTAATCAGCGTTACTACGGTGATGCTGTTCAGTCTGATCC
GGAGATTGCGGACGAATGGGCCCGAATCCCGCATTTCTACTATAACTACTATGTTTACCAGTACGCCACCGGCTTCGCGG
CAGCGAATACGCTGGCAGACCGGATCCTTTCTGGGGACACTAGCAAGCGCGATGCTTATCTGAATTACCTGAAGTCGGGC
AGTTCTGATTATCCGATCGAAGTGATGAAGAAGGCGGGCGTAGACATGTCACAAGAGACCTATCTCGACCAGGCGTTTGA
CCAGTTTGAAGCACGGTTGAATCAGTTTGAAAAATTGGTAGAGCGTGAAGGAAAACGGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
50.927 |
97.855 |
0.498 |