Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | A3224_RS15785 | Genome accession | NZ_CP014864 |
| Coordinates | 3806100..3807185 (-) | Length | 361 a.a. |
| NCBI ID | WP_074901695.1 | Uniprot ID | A0AB35HXS1 |
| Organism | Microbulbifer thermotolerans strain DAU221 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3801100..3812185
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A3224_RS17185 | - | 3801665..3801982 (+) | 318 | WP_231902414.1 | DUF1214 domain-containing protein | - |
| A3224_RS15760 (A3224_15760) | trmB | 3801975..3802691 (-) | 717 | WP_067156834.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| A3224_RS15765 (A3224_15765) | - | 3802752..3803129 (-) | 378 | WP_067156836.1 | DUF423 domain-containing protein | - |
| A3224_RS15770 (A3224_15770) | rpoH | 3803272..3804126 (-) | 855 | WP_067156839.1 | RNA polymerase sigma factor RpoH | - |
| A3224_RS15775 (A3224_15775) | ftsX | 3804351..3805382 (-) | 1032 | WP_231902415.1 | permease-like cell division protein FtsX | - |
| A3224_RS15780 (A3224_15780) | ftsE | 3805363..3806049 (-) | 687 | WP_067156841.1 | cell division ATP-binding protein FtsE | - |
| A3224_RS15785 (A3224_15785) | pilA | 3806100..3807185 (-) | 1086 | WP_074901695.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| A3224_RS15790 (A3224_15790) | rsmD | 3807260..3807826 (+) | 567 | WP_067156851.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| A3224_RS15795 (A3224_15795) | coaD | 3807901..3808380 (+) | 480 | WP_067156857.1 | pantetheine-phosphate adenylyltransferase | - |
| A3224_RS15800 (A3224_15800) | ggt | 3808447..3810192 (+) | 1746 | WP_067156858.1 | gamma-glutamyltransferase | - |
| A3224_RS15805 (A3224_15805) | - | 3810512..3811081 (-) | 570 | WP_067156859.1 | amidohydrolase family protein | - |
| A3224_RS15810 (A3224_15810) | mutM | 3811151..3811966 (-) | 816 | WP_067156862.1 | bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase | - |
Sequence
Protein
Download Length: 361 a.a. Molecular weight: 38775.08 Da Isoelectric Point: 5.0138
>NTDB_id=174827 A3224_RS15785 WP_074901695.1 3806100..3807185(-) (pilA) [Microbulbifer thermotolerans strain DAU221]
MIFDFLRKKKPKPDETVESQTAPEPPESAGDASTPKAEQPEAPREAAEPAPKKEGFFARIRRGLSRTSSQFAEGMGNLFL
GAKEIDEELLEELETQLLVADVGVEATGEIVDRLTERVSRRELADGDALYRALQEELGELLDTVEAPLVVDTSKKPFVIL
VVGVNGVGKTTTIGKLAHRYLREGRSVMLAAGDTFRAAAVEQLQVWGERHNVPVVAQHTGADSASVIYDAVQSARAKGID
VVIADTAGRLHTKSNLMEELAKVRRVMGKLDASAPHEVLLVLDAGTGQNAISQAQQFRDAAGVTGLVLTKLDGTAKGGVI
FALARKFGIPVRFIGVGEQAEDLQPFAAKEFVAALFGREAN
MIFDFLRKKKPKPDETVESQTAPEPPESAGDASTPKAEQPEAPREAAEPAPKKEGFFARIRRGLSRTSSQFAEGMGNLFL
GAKEIDEELLEELETQLLVADVGVEATGEIVDRLTERVSRRELADGDALYRALQEELGELLDTVEAPLVVDTSKKPFVIL
VVGVNGVGKTTTIGKLAHRYLREGRSVMLAAGDTFRAAAVEQLQVWGERHNVPVVAQHTGADSASVIYDAVQSARAKGID
VVIADTAGRLHTKSNLMEELAKVRRVMGKLDASAPHEVLLVLDAGTGQNAISQAQQFRDAAGVTGLVLTKLDGTAKGGVI
FALARKFGIPVRFIGVGEQAEDLQPFAAKEFVAALFGREAN
Nucleotide
Download Length: 1086 bp
>NTDB_id=174827 A3224_RS15785 WP_074901695.1 3806100..3807185(-) (pilA) [Microbulbifer thermotolerans strain DAU221]
ATGATCTTTGATTTCCTGCGCAAAAAGAAGCCCAAACCCGATGAAACAGTGGAGTCCCAGACGGCGCCGGAGCCCCCGGA
GTCAGCGGGGGATGCCTCTACTCCAAAAGCTGAGCAGCCCGAAGCGCCGCGCGAGGCCGCTGAGCCTGCGCCCAAAAAAG
AGGGCTTCTTCGCCCGAATCCGCCGCGGCCTCAGCCGCACCAGCAGTCAGTTTGCCGAGGGCATGGGCAACCTCTTCCTC
GGCGCTAAAGAGATAGACGAGGAACTGCTGGAAGAGCTGGAAACCCAACTGCTGGTGGCGGATGTGGGTGTCGAGGCCAC
TGGTGAAATTGTCGACCGCCTTACCGAGCGGGTTTCCCGGCGCGAACTGGCGGATGGCGATGCGCTCTACCGCGCCCTGC
AGGAAGAGCTGGGTGAGCTGCTGGATACAGTGGAGGCGCCACTGGTGGTCGATACGTCCAAGAAGCCTTTTGTGATCCTG
GTAGTGGGCGTCAACGGTGTTGGCAAGACCACGACCATCGGCAAGCTGGCCCACCGCTACCTGAGGGAAGGCAGGTCAGT
GATGCTGGCCGCGGGCGATACCTTCCGCGCCGCTGCGGTGGAGCAGCTGCAGGTCTGGGGGGAGCGCCACAATGTACCGG
TAGTGGCTCAGCACACCGGTGCCGACAGCGCCTCGGTTATCTACGATGCGGTGCAATCGGCGCGCGCCAAGGGGATTGAT
GTGGTGATTGCCGATACCGCCGGGCGCCTGCACACCAAGTCCAATTTGATGGAAGAGCTTGCCAAGGTGCGCCGGGTAAT
GGGCAAGCTGGACGCCAGCGCCCCGCACGAAGTACTGCTGGTGCTGGATGCCGGTACCGGCCAGAATGCCATCAGCCAGG
CCCAACAGTTCCGCGACGCGGCCGGTGTCACCGGCCTGGTGCTGACGAAGTTGGACGGCACCGCCAAGGGCGGTGTGATC
TTTGCCCTGGCACGCAAGTTCGGGATTCCGGTACGCTTTATCGGCGTCGGCGAGCAGGCCGAAGATCTACAGCCGTTTGC
CGCGAAAGAATTTGTCGCCGCGCTTTTCGGTCGCGAAGCGAACTGA
ATGATCTTTGATTTCCTGCGCAAAAAGAAGCCCAAACCCGATGAAACAGTGGAGTCCCAGACGGCGCCGGAGCCCCCGGA
GTCAGCGGGGGATGCCTCTACTCCAAAAGCTGAGCAGCCCGAAGCGCCGCGCGAGGCCGCTGAGCCTGCGCCCAAAAAAG
AGGGCTTCTTCGCCCGAATCCGCCGCGGCCTCAGCCGCACCAGCAGTCAGTTTGCCGAGGGCATGGGCAACCTCTTCCTC
GGCGCTAAAGAGATAGACGAGGAACTGCTGGAAGAGCTGGAAACCCAACTGCTGGTGGCGGATGTGGGTGTCGAGGCCAC
TGGTGAAATTGTCGACCGCCTTACCGAGCGGGTTTCCCGGCGCGAACTGGCGGATGGCGATGCGCTCTACCGCGCCCTGC
AGGAAGAGCTGGGTGAGCTGCTGGATACAGTGGAGGCGCCACTGGTGGTCGATACGTCCAAGAAGCCTTTTGTGATCCTG
GTAGTGGGCGTCAACGGTGTTGGCAAGACCACGACCATCGGCAAGCTGGCCCACCGCTACCTGAGGGAAGGCAGGTCAGT
GATGCTGGCCGCGGGCGATACCTTCCGCGCCGCTGCGGTGGAGCAGCTGCAGGTCTGGGGGGAGCGCCACAATGTACCGG
TAGTGGCTCAGCACACCGGTGCCGACAGCGCCTCGGTTATCTACGATGCGGTGCAATCGGCGCGCGCCAAGGGGATTGAT
GTGGTGATTGCCGATACCGCCGGGCGCCTGCACACCAAGTCCAATTTGATGGAAGAGCTTGCCAAGGTGCGCCGGGTAAT
GGGCAAGCTGGACGCCAGCGCCCCGCACGAAGTACTGCTGGTGCTGGATGCCGGTACCGGCCAGAATGCCATCAGCCAGG
CCCAACAGTTCCGCGACGCGGCCGGTGTCACCGGCCTGGTGCTGACGAAGTTGGACGGCACCGCCAAGGGCGGTGTGATC
TTTGCCCTGGCACGCAAGTTCGGGATTCCGGTACGCTTTATCGGCGTCGGCGAGCAGGCCGAAGATCTACAGCCGTTTGC
CGCGAAAGAATTTGTCGCCGCGCTTTTCGGTCGCGAAGCGAACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
49.858 |
97.784 |
0.488 |