Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   A3224_RS01015 Genome accession   NZ_CP014864
Coordinates   230943..231338 (+) Length   131 a.a.
NCBI ID   WP_067084389.1    Uniprot ID   A0A143HI02
Organism   Microbulbifer thermotolerans strain DAU221     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 225943..236338
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A3224_RS00990 (A3224_00990) hemC 226707..227624 (-) 918 WP_067150297.1 hydroxymethylbilane synthase -
  A3224_RS00995 (A3224_00995) ruvX 227691..228119 (-) 429 WP_067150300.1 Holliday junction resolvase RuvX -
  A3224_RS01000 (A3224_01000) - 228120..228704 (-) 585 WP_067150302.1 YqgE/AlgH family protein -
  A3224_RS01005 (A3224_01005) - 228744..229652 (-) 909 WP_082817340.1 energy transducer TonB -
  A3224_RS01010 (A3224_01010) gshB 229702..230658 (-) 957 WP_067150305.1 glutathione synthase -
  A3224_RS01015 (A3224_01015) pilG 230943..231338 (+) 396 WP_067084389.1 twitching motility response regulator PilG Regulator
  A3224_RS01020 (A3224_01020) pilH 231576..231938 (+) 363 WP_067150308.1 twitching motility response regulator PilH -
  A3224_RS01025 (A3224_01025) - 231955..232494 (+) 540 WP_067150311.1 chemotaxis protein CheW -
  A3224_RS01030 (A3224_01030) - 232659..234803 (+) 2145 WP_067150313.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14346.57 Da        Isoelectric Point: 7.2147

>NTDB_id=174808 A3224_RS01015 WP_067084389.1 230943..231338(+) (pilG) [Microbulbifer thermotolerans strain DAU221]
MELNWESLTVMVIDDSKTIRRTAETLLQKAGCTVVTATDGFDALAKIADSRPDIIFVDIMMPRLDGYQTCALIKNNSEFR
STPVVMLSSKDGLFDKAKGRVVGCDQYLTKPFSKSELLGAISAHAKPHHAA

Nucleotide


Download         Length: 396 bp        

>NTDB_id=174808 A3224_RS01015 WP_067084389.1 230943..231338(+) (pilG) [Microbulbifer thermotolerans strain DAU221]
ATGGAGCTCAACTGGGAAAGCCTGACGGTGATGGTGATCGACGACAGCAAGACGATTCGTCGCACCGCGGAAACTCTGTT
GCAAAAAGCGGGTTGTACGGTCGTTACCGCAACAGACGGATTCGATGCGCTGGCCAAAATCGCCGACTCCCGCCCGGATA
TCATCTTTGTCGATATCATGATGCCACGCCTGGATGGCTATCAGACATGTGCATTGATCAAGAATAACAGTGAATTTCGC
TCCACGCCGGTGGTGATGCTTTCGAGTAAGGATGGCTTATTTGACAAAGCCAAGGGGCGTGTTGTCGGCTGTGATCAGTA
TTTAACCAAGCCGTTCAGTAAAAGTGAGTTGCTCGGGGCTATTTCCGCGCATGCCAAGCCGCATCATGCAGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A143HI02

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

94.656

0.702
  vicR Streptococcus mutans UA159

41.026

89.313

0.366

Multiple sequence alignment