Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   A3L20_RS21995 Genome accession   NZ_CP014847
Coordinates   4380888..4381682 (-) Length   264 a.a.
NCBI ID   WP_014894889.1    Uniprot ID   A0A9X0VUZ1
Organism   Bacillus thuringiensis strain HD12     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4375888..4386682
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A3L20_RS21970 (A3L20_21970) - 4376440..4378512 (-) 2073 WP_000810981.1 sigma-54 interaction domain-containing protein -
  A3L20_RS21975 (A3L20_21975) - 4378649..4378882 (+) 234 WP_001190195.1 DUF2627 domain-containing protein -
  A3L20_RS21980 (A3L20_21980) - 4378932..4379660 (-) 729 WP_000172594.1 glycerophosphodiester phosphodiesterase -
  A3L20_RS21985 (A3L20_21985) - 4379711..4379857 (+) 147 WP_001247671.1 YycC family protein -
  A3L20_RS21990 (A3L20_21990) - 4380071..4380634 (-) 564 WP_000791083.1 PRK06770 family protein -
  A3L20_RS21995 (A3L20_21995) spo0A 4380888..4381682 (-) 795 WP_014894889.1 sporulation transcription factor Spo0A Regulator
  A3L20_RS22000 (A3L20_22000) spoIVB 4381972..4383270 (-) 1299 WP_002000940.1 SpoIVB peptidase -
  A3L20_RS22005 (A3L20_22005) recN 4383389..4385128 (-) 1740 WP_000947759.1 DNA repair protein RecN Machinery gene
  A3L20_RS22010 (A3L20_22010) argR 4385393..4385842 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29385.15 Da        Isoelectric Point: 7.1175

>NTDB_id=174725 A3L20_RS21995 WP_014894889.1 4380888..4381682(-) (spo0A) [Bacillus thuringiensis strain HD12]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLADKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANAMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=174725 A3L20_RS21995 WP_014894889.1 4380888..4381682(-) (spo0A) [Bacillus thuringiensis strain HD12]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAGCAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAAAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTCGGGCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACGCTATGATTAAACGTCCAC
TACCATCATTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAACGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACAACAGCAAGCCGTGTGGAGCGCGCAATTC
GTCACGCGATTGAAGTAGCGTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAAGCTAGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment