Detailed information NTG0174614

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ATSB10_RS10955
• Genome accession: NZ_CP014841
• Coordinates: 2386213..2387622 (+)
• Length: 469 a.a.
• NCBI ID: WP_063672776.1
• Uniprot ID: A0A160N1K7
• Organism: Dyella thiooxydans strain ATSB10
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2381213..2392622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ATSB10_RS10945 (ATSB10_22470)	-	2383705..2384970 (+)	1266	WP_063672772.1	MFS transporter	-
ATSB10_RS10950 (ATSB10_22480)	-	2385136..2386140 (+)	1005	WP_236886405.1	alpha/beta hydrolase	-
ATSB10_RS10955 (ATSB10_22490)	pilR	2386213..2387622 (+)	1410	WP_063672776.1	sigma-54 dependent transcriptional regulator	Regulator
ATSB10_RS10960 (ATSB10_22500)	-	2387662..2389221 (-)	1560	WP_063672778.1	response regulator	-
ATSB10_RS10965 (ATSB10_22510)	-	2389290..2389736 (-)	447	WP_063672779.1	response regulator	-
ATSB10_RS10970 (ATSB10_22520)	-	2389733..2391532 (-)	1800	WP_083966186.1	ATP-binding protein	-

Sequence

Protein

• Length: 469 a.a.
• Molecular weight: 50458.90 Da
• Isoelectric Point: 5.9839

>NTDB_id=174614 ATSB10_RS10955 WP_063672776.1 2386213..2387622(+) (pilR) [Dyella thiooxydans strain ATSB10]
MSLQTVLVVDDERDIRELLTITLGRMDLQVDAVGTVGEAKRALAERSYDLCFTDMRLPDGTGHEVIELIAEQHPDTPVAM
ITAYGNVDAAVSALKAGAFDFVSKPVDIQMLRRLVRTALKLAEEKRGEGGASTGGGSSDRLIGDSAVMQQVRATIGKLAR
NQAPVYIAGESGVGKELVARLIHEQGPRASGPFVPVNCGAIPTELMESEFFGHKRGSFTGAASDKEGLFQAANGGTLFLD
EVAELPLHMQVKLLRAIQEKAVRPIGAREEVPVDVRILSATHKNLAALVDQGQFRQDLFYRINVIELRVPPLRERRGDVP
LLAAHILRQLAAKSGMAPGRLLPAAQQALDEYDFPGNVRELENVLERAMAMSDGESIDAADLMLPQRASRPAFDAGIAAP
SATVAGAIEAAPPATPGSGVALEDYISNLERTAIMKALEESRYNKTAAAKKLGITFRALRYKLKKLGID

Nucleotide

• Length: 1410 bp

>NTDB_id=174614 ATSB10_RS10955 WP_063672776.1 2386213..2387622(+) (pilR) [Dyella thiooxydans strain ATSB10]
ATGAGCCTACAGACTGTCCTGGTCGTCGACGACGAACGCGACATCCGCGAACTGCTCACCATCACCCTCGGCCGCATGGA
CCTGCAGGTGGACGCGGTCGGCACCGTCGGCGAGGCCAAGCGCGCGCTGGCCGAACGCAGCTACGACCTGTGCTTCACCG
ACATGCGCCTGCCCGACGGTACCGGCCACGAGGTGATCGAACTGATCGCCGAACAGCACCCGGACACGCCGGTGGCCATG
ATCACGGCCTACGGCAACGTCGATGCGGCGGTGAGCGCACTGAAGGCTGGCGCCTTCGACTTCGTCTCCAAGCCGGTGGA
CATTCAGATGCTGCGGCGGCTGGTGCGCACGGCGCTGAAGCTGGCCGAGGAAAAGCGCGGCGAGGGCGGTGCCAGCACCG
GTGGCGGCTCCAGCGACCGGCTGATCGGCGACTCGGCGGTGATGCAGCAGGTGCGCGCCACCATCGGCAAGCTGGCGCGC
AACCAGGCGCCGGTGTACATCGCCGGCGAGTCCGGCGTCGGCAAGGAGCTGGTCGCCCGGCTGATCCACGAGCAGGGCCC
GCGTGCCTCGGGTCCGTTCGTGCCGGTGAACTGCGGCGCGATTCCCACCGAGCTGATGGAAAGCGAGTTCTTCGGCCACA
AGCGCGGCAGCTTCACCGGTGCGGCCAGCGACAAGGAAGGCCTGTTCCAGGCCGCCAACGGCGGCACCCTGTTCCTCGAC
GAGGTGGCCGAGCTGCCGCTGCACATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAGAAGGCGGTGCGCCCGATCGGTGC
CCGCGAGGAAGTGCCGGTGGACGTGCGCATCCTGTCGGCCACGCACAAGAACCTGGCGGCCCTGGTCGACCAGGGCCAGT
TCCGCCAGGACCTGTTCTACCGCATCAACGTGATCGAGCTGCGTGTGCCGCCGCTGCGCGAGCGCCGTGGCGACGTGCCG
CTGCTGGCCGCGCACATCCTGCGCCAGCTGGCCGCCAAGAGCGGCATGGCGCCGGGCCGCCTGCTGCCGGCCGCGCAGCA
GGCGCTGGACGAGTACGACTTCCCCGGCAACGTGCGCGAGCTGGAGAACGTGCTGGAGCGTGCGATGGCGATGAGCGACG
GCGAAAGCATCGACGCCGCCGACCTGATGCTGCCGCAGCGTGCATCGCGACCGGCCTTCGATGCCGGCATCGCCGCTCCG
TCGGCTACCGTGGCCGGTGCCATCGAAGCCGCGCCACCGGCCACTCCAGGCAGCGGCGTGGCGCTGGAGGACTACATCAG
CAACCTCGAACGCACGGCGATCATGAAGGCGCTGGAGGAGTCGCGCTACAACAAGACCGCCGCCGCCAAGAAACTCGGCA
TCACCTTCCGCGCGCTGCGCTACAAGCTCAAGAAGCTGGGTATCGACTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (141-307)

• Response regulator receiver domain (Response_reg) (6-115)

• Bacterial regulatory protein, Fis family (HTH_8) (427-466)

3D structure

• AlphaFold DB: A0A160N1K7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	60.981	100	0.61
pilR	Acinetobacter baumannii strain A118	49.682	100	0.499