Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   A2G56_RS03505 Genome accession   NZ_CP014835
Coordinates   784037..785797 (-) Length   586 a.a.
NCBI ID   WP_062712424.1    Uniprot ID   -
Organism   Streptococcus halotolerans strain HTS9     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 779037..790797
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2G56_RS03485 rpsU 780041..780217 (-) 177 WP_002884573.1 30S ribosomal protein S21 -
  A2G56_RS03490 - 780301..780873 (-) 573 WP_062712422.1 uracil-DNA glycosylase family protein -
  A2G56_RS03495 - 781092..781823 (-) 732 WP_062709092.1 GDSL-type esterase/lipase family protein -
  A2G56_RS11060 - 781867..781995 (-) 129 WP_257721920.1 hypothetical protein -
  A2G56_RS03500 rcrQ 782299..784047 (-) 1749 WP_062709095.1 ABC transporter ATP-binding protein Regulator
  A2G56_RS03505 rcrP 784037..785797 (-) 1761 WP_062712424.1 ABC transporter ATP-binding protein Regulator
  A2G56_RS03510 - 785839..786282 (-) 444 WP_062709098.1 MarR family winged helix-turn-helix transcriptional regulator -
  A2G56_RS03515 - 787180..788388 (-) 1209 WP_237334436.1 DegT/DnrJ/EryC1/StrS family aminotransferase -
  A2G56_RS03520 - 789920..790636 (-) 717 WP_062709103.1 SDR family NAD(P)-dependent oxidoreductase -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64542.73 Da        Isoelectric Point: 5.6523

>NTDB_id=174459 A2G56_RS03505 WP_062712424.1 784037..785797(-) (rcrP) [Streptococcus halotolerans strain HTS9]
MIALSTVFICLAVWMDIATPSYMSDITKLLQEKGTTTSDIMEPGWKMLALSLGSFVMAVCVGFLAARTAASFTTRLRSDI
FNQVMNYSDAEIKQFSVPSLLTRTTNDLTQLQILITMGMQVVTRGPIMAVWALTKIWGKSSEWTWSVVIAVAVVMLLLAT
LLIFAFPRLQKVQRYTDGLNATMREILSGIRVLRAYNAEDYQDAKFSAQNVALTRLNLFVSRLFALMNPVMTVVSSGLTL
AIYWIGAQMIDGIVITMTSRAAAIASVQDRITVFSDMVVFSSYAMQVVMGFMMMVAIFIILPRALVSAGRIEEVLSLEPS
VSFNKKTTVKTDTKGEVEYRNVSFKYTEDSDAVIENVSFKASAGQTIAFIGSTGSGKTTLVNLLPRFYDVTAGQILIDGI
DIKDYSHEELNNKVGYIPQKAVLFSGTIRSNMTFGESSQAQLDDAAIWDALELAQAKAFVQSKEEGLETEVAQGGTNFSG
GQRQRLAIARALARKPEILIFDDSFSALDYKTDRTLRKALSEKTSQVTKLIVAQRVSTIMDADQILVLDQGKVVGQGSHQ
DLLANNVVYQEIAYSQLSKEELKGEN

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=174459 A2G56_RS03505 WP_062712424.1 784037..785797(-) (rcrP) [Streptococcus halotolerans strain HTS9]
ATGATTGCCTTATCTACCGTTTTTATTTGTTTGGCGGTCTGGATGGATATTGCAACGCCGTCTTACATGTCAGACATTAC
CAAATTACTTCAAGAAAAAGGGACGACCACTTCCGATATTATGGAGCCAGGCTGGAAAATGCTTGCTTTGTCATTGGGGA
GTTTTGTTATGGCAGTCTGTGTTGGCTTTCTAGCTGCTCGTACGGCAGCCAGTTTTACGACGCGCCTACGCTCTGATATT
TTTAATCAGGTCATGAATTATTCGGATGCAGAAATCAAACAATTCTCCGTACCCAGTCTGTTAACACGGACAACTAATGA
CTTAACACAGCTGCAAATCCTAATCACAATGGGTATGCAAGTGGTGACACGTGGCCCAATTATGGCTGTCTGGGCTTTAA
CGAAAATTTGGGGTAAAAGCAGCGAGTGGACATGGTCTGTTGTCATTGCAGTTGCTGTGGTTATGCTGTTATTAGCAACG
CTCTTGATTTTTGCGTTTCCGCGTCTCCAAAAAGTACAACGATACACTGATGGGCTAAATGCTACCATGCGGGAAATTCT
ATCGGGGATTCGTGTCCTTCGTGCCTACAACGCTGAGGACTATCAAGATGCTAAATTTTCAGCCCAAAATGTGGCCTTAA
CGCGCTTGAATCTTTTTGTAAGCCGATTGTTTGCTCTTATGAATCCAGTCATGACTGTGGTTTCAAGTGGTTTGACTTTG
GCTATCTATTGGATTGGAGCGCAAATGATCGATGGTATTGTCATCACGATGACTTCACGGGCTGCGGCTATCGCGAGTGT
TCAAGATCGTATCACTGTTTTTAGTGATATGGTTGTTTTTTCTTCCTATGCTATGCAAGTCGTTATGGGCTTCATGATGA
TGGTTGCTATCTTTATTATCTTGCCGCGTGCCTTGGTTTCAGCAGGTCGTATTGAAGAGGTTCTATCCCTAGAGCCAAGC
GTTAGTTTTAACAAAAAAACAACTGTTAAGACAGACACAAAAGGTGAGGTTGAATACCGAAACGTCAGTTTTAAATACAC
CGAAGATTCAGATGCTGTTATTGAAAACGTTTCGTTCAAAGCTAGTGCTGGTCAAACCATTGCTTTTATTGGTTCAACAG
GTTCTGGTAAAACAACTTTAGTTAACCTTCTGCCACGTTTTTACGATGTGACAGCAGGTCAGATTTTAATCGACGGGATT
GATATTAAGGATTATAGTCACGAAGAGCTGAATAATAAGGTAGGATATATTCCTCAGAAAGCAGTTCTTTTTAGTGGTAC
TATCCGTTCTAACATGACCTTTGGCGAGAGCAGTCAAGCTCAACTTGATGATGCTGCTATATGGGATGCGCTTGAATTGG
CACAAGCTAAAGCGTTTGTTCAAAGCAAGGAAGAGGGGCTTGAAACAGAAGTAGCCCAAGGGGGGACCAATTTTTCTGGA
GGACAGCGCCAACGTTTAGCTATTGCGCGTGCGCTTGCTCGTAAGCCAGAAATCTTGATTTTTGACGATTCTTTCTCAGC
ACTTGACTATAAGACGGATCGCACTCTTCGGAAAGCTTTGAGTGAAAAGACTAGTCAGGTAACCAAACTCATTGTGGCGC
AAAGGGTTTCGACCATTATGGATGCTGATCAGATTTTGGTTCTAGACCAAGGTAAAGTCGTTGGTCAAGGCAGTCACCAG
GATCTTTTGGCAAACAATGTCGTTTATCAAGAAATTGCTTATTCACAATTATCAAAGGAGGAATTGAAAGGTGAAAATTA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(3-252)

ABC transporter (ABC_tran)

(355-504)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

74.443

99.488

0.741

Multiple sequence alignment